Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0560 ATGGCATTTATAAAATGGGTTCCTTATGTTTTGGTTGTTTTTCTAGTTTTGGTGAATGGGTCATATGCCTTATACACTCCACCTGATAGTTATCTAATTGCTTGTGGTTCTTCTCAAAATATTACCTTCCAAGGTCACACTTTTGTTCCTGATTCACTGCATTCATCACTTGTATTAAAAACTGGGAATTCTTTTGTTGCCAGTTCTAATTCCAGTAGTGTCCCTTTTCCAATCTACCAATCTGCTAGGATTTTCACCGATAAAGCTTCTTATAGATTTGAAATTCAGCAAGAGGGTAGGCACTGGGTCAGGCTATATTTTTTCCCTCTTCCAAACTCTGGTCATAATTTGACTTCTGCTTCTATGACAGTGGTTACTGATAATCTTGTCCTCTTGAATAATGTTACCTTTAGGAACTATAATGGTTCTTATATGTTCAAGGAGTATGCAGTTAATGTTACCTCTGATACTTTGACCGTTACCTTCATTCCTTCAAATGGTTCGGTGGCCTTTGTAAATGGAATTGAAGTCGTGTCAATGCCAGATGAGTTGTTTGTTGATCAGGCACTGGCTCTTAACCCATCAGCCCCATTTAGTGGACTTTCTGAGCTTGCTTTTGAAACAGTTTATCGTTTAAACATGGGGGGTCCTTTGATTACTGCCCAAAATGACACCCTGGGAAGGACTTGGGTGAATGATCTGAACTACCTTCATGTGAACAGTTCTGTGTTTAATGTCTCAGTCAGTCCTTCGACGATTAAGTATCATGCAGGTGTTACTCCTGAGACAGCGCCAAATTTGGTCTATGCCACTGCTGAAACAATGGGGGATCCAAATGTAGGCAACCCAAATTTCAACATCACTTGGATCTTCACTGTGGATCCAAATTTTTCCTATTTTATTCGGGTGCACTTTTGTGATATTATAAGCAAGTCACTTAACACTTTGGTGTTCAATTTATTCATAAATTCAGACATAGCTCTTGGAAGTCTTGACCTCTCATCCTCAACCAATGATTTGGCTGTGCCTTATTTCAAGGACTTCGTTTCCAATGCCTCAGCAGACTCTAAAACTTTGACTGTAAGTGTTGGTCCAGATACAATGGCAGACATCACAAATGCAACTATGAATGGGCTAGAGATAATGAAGATCAGCAATGCATTGAAGAGCTTGGATGGTCTTTCTTCAGTTGACAATCTTCTTCCTAGATCACCTTCAGAGAAGAACAAAATAGGAATAATAGTTGGTTCTGCACTTGGTGCTCTAGCTGCTATAGCATTGGTTGGTTTCTGTTGCTGCTGCTTGGTAAGGCACAAGTCAAAGTCTCCTCAACAGGGCATTTCACGGCTGCCGTTATCCCTATTTGGAAACTCTCTGACATTGACAAAAATGTCAACAACTTCACAGAAGAGTGGAACTGCAAGCTGCATTTCTTTAACTTCAACGAATCTGGGCCGTTTCTTCAGTTTCCAAGAAATCCTAGATGGAACCAACAAGTTTGATGAAAAGCTGCTTCTTGGTGTTGGTGGTTTTGGTAGGGTTTATAAAGGAACACTCGAAGACGGGACTGTTGTAGCTGTTAAAAGAGGCAATCCAAGATCTGAACAAGGTCTTGCTGAATTCCGAACAGAAATTGAAATGCTGTCCAAGCTTCGCCACCGTCATCTCGTGTCTCTCATTGGCTATTCTGATGAGAGGTCAGAAATGATTCTTGTCTATGAATACATGGCCAATGGACCCCTTAGGAGTCATTTGTATGGAACAGACCTGCCACCTCTATCATGGAAGCAACGGCTTGAAATTTGCATTGGAGCAGCGAGAGGCCTCCATTATCTTCACACTGGTGCAGCTCAAAGCATAATTCACCGAGATGTAAAGACAACAAATATCCTCTTAGATGAGAACTTTGTTGCTAAGGTTGCTGATTTTGGCCTCTCCAAAACTGGTCCTGCCCTTGATCAGACTCATGTGAGCACTGCTGTTAAAGGTAGTTTCGGTTATCTTGATCCTGAATACTTTAGAAGACAACAGCTTACTGAGAAATCAGATGTGTATTCATTTGGAGTAGTTTTAATGGAAGTGTTATGCACAAGACCGGCCTTGAACCCTGTCCTTCCAAGAGAGCAGGTTAATATAGCTGAATGGGCAATGAGCTGGCAGAAAAAAGGGATGCTTGATCAAATCATGGATCAAAATCTGGTGGGGAAGGTTAATCTTGCTTCTCTTAAAAAGTTTGGGGAGACAGCTGAGAAGTGCTTGGCTGAGTATGGCGTGGACAGGCCGTCTATGGGAGATGTCTTATGGAATCTTGAATATGCTTTGCAGCTTCAAGAGACCTCATCAGCCCTCACAGAACCTGAAGATAACAGCACAAACCACATTACTGGTATTCAGTTGACTCCAGTCGATCATTTTGATAACAGTGTGAGTATGATTGAAGGGGTAAACTCTTGCACGGACGAAGATCCAGAAGATGCTGCCACAAGTGCAGTGTTCTCACAATTGGTAAATCCTCGTGGAAGATGA 2526 0.4161 MAFIKWVPYVLVVFLVLVNGSYALYTPPDSYLIACGSSQNITFQGHTFVPDSLHSSLVLKTGNSFVASSNSSSVPFPIYQSARIFTDKASYRFEIQQEGRHWVRLYFFPLPNSGHNLTSASMTVVTDNLVLLNNVTFRNYNGSYMFKEYAVNVTSDTLTVTFIPSNGSVAFVNGIEVVSMPDELFVDQALALNPSAPFSGLSELAFETVYRLNMGGPLITAQNDTLGRTWVNDLNYLHVNSSVFNVSVSPSTIKYHAGVTPETAPNLVYATAETMGDPNVGNPNFNITWIFTVDPNFSYFIRVHFCDIISKSLNTLVFNLFINSDIALGSLDLSSSTNDLAVPYFKDFVSNASADSKTLTVSVGPDTMADITNATMNGLEIMKISNALKSLDGLSSVDNLLPRSPSEKNKIGIIVGSALGALAAIALVGFCCCCLVRHKSKSPQQGISRLPLSLFGNSLTLTKMSTTSQKSGTASCISLTSTNLGRFFSFQEILDGTNKFDEKLLLGVGGFGRVYKGTLEDGTVVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYSDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMSWQKKGMLDQIMDQNLVGKVNLASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLQETSSALTEPEDNSTNHITGIQLTPVDHFDNSVSMIEGVNSCTDEDPEDAATSAVFSQLVNPRGR 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0560 841 SUPERFAMILY Protein kinase-like (PK-like) 478 771 IPR011009 -
Lal1g0560 841 Gene3D - 204 386 - -
Lal1g0560 841 Gene3D - 30 181 - -
Lal1g0560 841 PANTHER OS07G0166700 PROTEIN 17 834 IPR045272 GO:0004714|GO:0006468
Lal1g0560 841 Pfam Protein tyrosine and serine/threonine kinase 505 766 IPR001245 GO:0004672|GO:0006468
Lal1g0560 841 ProSiteProfiles Protein kinase domain profile. 500 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0560 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Lal1g0560 841 ProSitePatterns Protein kinases ATP-binding region signature. 506 528 IPR017441 GO:0005524
Lal1g0560 841 Gene3D Transferase(Phosphotransferase) domain 1 576 795 - -
Lal1g0560 841 CDD STKc_IRAK 506 771 - -
Lal1g0560 841 Gene3D Phosphorylase Kinase; domain 1 460 575 - -
Lal1g0560 841 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 17 834 - -
Lal1g0560 841 Pfam Malectin-like domain 33 384 IPR024788 -
Lal1g0560 841 SMART serkin_6 500 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0560 Lal-Chr1 3614669 3617194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0560 23 791 Receptor kinase-like Gene Family AT2G21480 53.856 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lal1g0560 Malectin_like 1e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0560 - - gmx:100809700 1404.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0560 1 3614669 3617194 Lal1g0560 1 3614669 3617194 ECH