Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0556 ATGGCAGCAGCAACATTAATGGCAGCCACAGCTAGTTCCAGCACTGTCCTTAAACCAACCACTTTCCGTGGCCAAAACAAGGGAACAAATGCCAACCCTCTTAGAGATTTTGTCTCAATGGGTGCTGGAAAATACACCATGGGAAATGAATTGTGGTATGGACCAGACAGGGTGAAATACTTGGGACCCTTTTCAGCTCAAACACCTTCATACTTGAATGGAGAATTCCCAGGGGATTATGGATGGGACACTGCTGGTTTGTCTGCTGATCCTGAAGCATTTGCCAAGAATAGGGCTCTTGAGGTGATTCATGGGCGTTGGGCTATGCTTGGAGCACTAGGCTGCATCACACCCGAAGTTCTTGAAAAGTGGGTTAGAGTGGACTTCAAGGAACCGGTTTGGTTCAAAGCTGGAGCTCAAATCTTCTCAGAAGGTGGCCTTGACTATTTGGGAAACCCAAACCTTGTTCATGCACAAAGCATCCTAGCAGTGCTAGGCTTCCAAGTTGTTCTGATGGGACTTGTTGAAGGGTTCAGAATCAATGGCCTTCCTGATGTAGGAGAGGGTAATAACCTCTACCCTGGGGGTCAGTACTTTGACCCTCTTGGTCTTGCCGATGACCCTGTCGCTTTCGCTGAGCTTAAAGTGAAGGAAATCAAGAATGGAAGATTGGCTATGTTCTCCATGTTTGGTTTCTTTGTCCAAGCCATTGTCACAGGTAAAGGCCCTCTTGAGAATCTCTTGGATCACCTTGACAACCCTGTTGCTAACAATGCTTGGGTCTATGCCACCAAGTTTGTACCTGGTTCTTAA 813 0.4699 MAAATLMAATASSSTVLKPTTFRGQNKGTNANPLRDFVSMGAGKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPDVGEGNNLYPGGQYFDPLGLADDPVAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0556 270 Pfam Chlorophyll A-B binding protein 69 236 IPR022796 -
Lal1g0556 270 Gene3D Chlorophyll a/b binding protein domain 59 263 - -
Lal1g0556 270 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 8 270 IPR001344 GO:0009765|GO:0016020
Lal1g0556 270 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 8 270 - -
Lal1g0556 270 SUPERFAMILY Chlorophyll a-b binding protein 51 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0556 Lal-Chr1 3582678 3587943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0556 1 269 Chloroplast and Mitochondria Gene Families AT2G05070 66.426 8.13e-124 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0556 K08914 - qsu:112007400 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0556 1 3582678 3587943 Lal1g0556 1 3582678 3587943 ECH