Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0555 ATGATGTTATCAGCTTCGCCATCTTCTCTGGCGAAGAGCAGGCTAGAAGTGATGCTTGATTCTCTTCGCCAGAAGGACGAAGAAGATGAAAAGAGGCGGAAGGACTCGCCTCCGGCATTGCCTCCTCGTCCGGCCTCAAAGGCCCGCCTTCCTCCGGCGAGGCGGTCCTTGCCGAACAACTTCAAGGTTAGCAGTGATCACAGTGCTGAGGAGTGTTTGCCAAATGGATTTGATGCCAAAGAAGAGAGCAAAAAGAATGAAAAAGAGTTAGTATTGGGACACAAGAGAAGTAGTAGTTTTAGTAGGAAGAAGGTGAAGATGAATGTGGATTCACCTTACATGGCTGCATCAGAAGAGAACATAACACTTTTGATAAATACTGCGTCATCAGGGACTATTGGAGAGTTGGAAGATGACACCATTTCTTATTTCATCAAAAAGAAACTACGCGTTTGGTGTACGCAACCTCGAGGGCAGTGGGAACTAGGAACTATACTGTCATCCTCAGGAGAGGAAGCATCTGTATTACTATCAAATGGAAAGGTTATGAAAGTGGCAAGATCAGAACTCCTACCAGCTAATCCTGACATTTTAGAGGGTGTGGATGATCTTATCAAGCTCAGTTATTTAAATGAGCCATCAGTTCTTCACAATCTTAAGTTTAGATATTCTAAGGAGATGATTTATAGTAAAGCGGGGGCCATCCTGATTGCACTGAATCCCTTCAAAGATCTCCAGATTTATGAAAATGATTATGTCTCAGGTTACAGGCAAAAATTTAGTGATAGTCATCATGTTTATACTTTGACAGATGCGGCTTATAATGATATGATAAGAGATGAACTAAATCAATCAATAATCATAAGTGGTGAGAGTGGATCTGGGAAGACAGAGACGGCAAAAATTGTCATCCAATACTTAGCTGCTCTTGGAGGTGGCAGTTGTGGGATAGAAAATGAAATTCTTCAAACAAATTGTATACTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATGAAAACTCTAGCAGATTTGGAAAGTTGATTGAAATTTATTTCAGCTCAATGGGTAAAATATGCAGGGCCAAGTCAAGAGTTGTACAACTGGGCAGCAGTGAGAGGTCATATCACATATTTTATCAGCTTTGTGCTGGAGCTTCATCTGGTCTTAAAGAGAGACTGAATCTTAGATCAGTCAGTGATTATAAATATCTTAATCAGAGTGACTGCATGACAATTTGCAACGTTGATGATGCTAAAAAGTTTCAGCATCTGATGAAAGCGCTTGATACTGTTAGAATTTGTGAAGAGGATCAAGAACTGATCTTTAAGATTCTTGCTGCAATACTATGGCTGGGAAATATATCATTCCAAGTTATTGATAGTGAAAATCACATTGAGGTTGTTGATGATGAAGCTGTAACCAGTGCTGCCTTGCTCATGGGTTGCAACTCCCGGGAATTAATGGCAGCATTATCTACCCATAAAACCCAATCTGGTGATGCTACTGTTGTTAAAAGGTTGACATTACAGCAGGCAATTGATGCCAGAGATGCAACTGCAAAGTTTATTTATTCAAGCTTGTTTGAGTGGCTAGTAGAACAACTTAACAATTCACTTGAAGTGGATAAAAAATGTACTGGTAAATCCATAAGTATCCTTGATATTTATGGGTTTGAGTCCCTCAAGAAAAACAACTTTGAACAGTTCTGTAAAAATTATGCCAATGAGAGGCTACAACAACATTTCATTCGACATTTGTTTAAACTTGAGCAGGAGGACTACGAATCTGATGGCATTGATTGGACTAAAATAGATTTTGAGGACAATCAAGAGTGCTTGGATCTCTTTGAGAAGAAACCTCTTGGTCTACTCTCTTTGTTGGATCAAGAATCAAGTTTGCCCAAGGCTTCTGATCTAACATTTGCCAACAAACTTAAGCAGCACCTGGATGCTAATCCTTGCTTCAAGGGGGAAAGAGGCAGAGCTTTCAGTGTTCGTCACTACACCGTGGAGGTTTTGTATGATACAAATGGCTTTCTAGAAAAGAACAGAGATACACTGCCTTCTGATTCTCTCCAACTCCTGTCATCATGTAATTGTGGATTGCTGCAGTTTTTCTCAAAAAGGTCTAGCGAGTCTCAGAGTCAATCAAATTTCCTTCGCACAGTTGCATTGGACTCACAGAAGCAGGGTGTTGGAACAAATTTCAAGGGTCAATTGTTCAAGTTGATCCATCAGTTGGAGAGCACCAAACCTCACTTTGTTCACTGCATAAGGCCAAATAATAAGCAGCTTCCAGGCATTTATGACGAAGACCTTGTCCTACAACAGCTAAGGTGCTGTGGAGTTCTAGAGGCTGCTAGAATTTCAAGGGTTGGATATCCTACTCGAATGACTCATCAAGAGTTCTCCAGAAGGTACGGGTTTCTGCTTTCTGAGGATTACGTATCTCAGGATCCATTAAGCATCTCAGTATCTGTTCTGCAACAATTTCATATTCCTCTTGAAATGTACCAAGTTGGCTACACGAAACTGTATCTTCGAGCACAGCAGATTGGTGCATTGGAGGATAAGAGAAAACAGGTTTTTCAGGGAATACTCGGGATTCAAAAATGCTATGGCGGTTATCAAGATCGCACTTTTTTCTGTGAATTTACAAACGGAGTGACAACATTACAATCATTTGTTCGTGGAGAAATTACGAGAAGGAAATATGGTGTTACAGTGAAATCTTCTGTAACAAATTATTCCAAAAAACTTGAGGAGATGCATGCAATCATACTACTACAATCTGTAATTCGTGGGTGGCTGGTTCGAAGGGGTGGCATGAATAAGTTGCAGAGATATGCTAAAATTGAAAAACCTAGGCGGAAATCACGTGTGGAGATGCCAGAAGTAAAGCAAGATATGTCCAAAGAGCAGCTTCAATCAGCTTTAGAAGAACTCCAAATTCAGCTTGGCAATGCAGAAGCGATTGCAGAGCAAAAGGAAGAGGAAAATACTGAATTGAAGGAACAGCTAAAACAATCTAAGGAAAGGTGGGCTGAATATGAGGCAAAGATGAAATCAGTGGAGGAGGCATGGCAAAAACAGATGGCATCTTTGCAAATGAGTCTTGTTGCTGCTAGAAAGAGCCTCGCTTCGGAGAATGGTACTGTTCAACCAGAAAAACACAATGTTACTTTGCCTCGCTACTATGTTTCTGAAGATGCTACTTCGATAGGATCTCATACAACTGGTGTGAGCACACATATGAAGATTATGAGTGGTCTCTGTGCCTCTGATGGAGGGAGACAGGGTAACGGTACTTTGACTACTGTTAGCAATCTGATGAAGGAATTTGAACATCGGAGACATAACTTCGATGATGAAATAAAAGTTCTGAACGAGGTCAAACCAGGGAAGTCTGCTAACTCAAATGATATTCGAGAATTTCTGAAACTTAAACATAGATTTGAGGGATGGAAGAAGCAATACAAGGTTAGATTACAAGAGACAAAAGCAAGGCTTCATAAATCAGAGACGGGGAAAAGTCGGCGGACATGGTGGGAAAAAGTGAGCTCGAGGGCGTAA 3576 0.4069 MMLSASPSSLAKSRLEVMLDSLRQKDEEDEKRRKDSPPALPPRPASKARLPPARRSLPNNFKVSSDHSAEECLPNGFDAKEESKKNEKELVLGHKRSSSFSRKKVKMNVDSPYMAASEENITLLINTASSGTIGELEDDTISYFIKKKLRVWCTQPRGQWELGTILSSSGEEASVLLSNGKVMKVARSELLPANPDILEGVDDLIKLSYLNEPSVLHNLKFRYSKEMIYSKAGAILIALNPFKDLQIYENDYVSGYRQKFSDSHHVYTLTDAAYNDMIRDELNQSIIISGESGSGKTETAKIVIQYLAALGGGSCGIENEILQTNCILEAFGNAKTSRNENSSRFGKLIEIYFSSMGKICRAKSRVVQLGSSERSYHIFYQLCAGASSGLKERLNLRSVSDYKYLNQSDCMTICNVDDAKKFQHLMKALDTVRICEEDQELIFKILAAILWLGNISFQVIDSENHIEVVDDEAVTSAALLMGCNSRELMAALSTHKTQSGDATVVKRLTLQQAIDARDATAKFIYSSLFEWLVEQLNNSLEVDKKCTGKSISILDIYGFESLKKNNFEQFCKNYANERLQQHFIRHLFKLEQEDYESDGIDWTKIDFEDNQECLDLFEKKPLGLLSLLDQESSLPKASDLTFANKLKQHLDANPCFKGERGRAFSVRHYTVEVLYDTNGFLEKNRDTLPSDSLQLLSSCNCGLLQFFSKRSSESQSQSNFLRTVALDSQKQGVGTNFKGQLFKLIHQLESTKPHFVHCIRPNNKQLPGIYDEDLVLQQLRCCGVLEAARISRVGYPTRMTHQEFSRRYGFLLSEDYVSQDPLSISVSVLQQFHIPLEMYQVGYTKLYLRAQQIGALEDKRKQVFQGILGIQKCYGGYQDRTFFCEFTNGVTTLQSFVRGEITRRKYGVTVKSSVTNYSKKLEEMHAIILLQSVIRGWLVRRGGMNKLQRYAKIEKPRRKSRVEMPEVKQDMSKEQLQSALEELQIQLGNAEAIAEQKEEENTELKEQLKQSKERWAEYEAKMKSVEEAWQKQMASLQMSLVAARKSLASENGTVQPEKHNVTLPRYYVSEDATSIGSHTTGVSTHMKIMSGLCASDGGRQGNGTLTTVSNLMKEFEHRRHNFDDEIKVLNEVKPGKSANSNDIREFLKLKHRFEGWKKQYKVRLQETKARLHKSETGKSRRTWWEKVSSRA 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0555 1191 SMART MYSc_2a 193 862 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal1g0555 1191 Gene3D - 562 751 - -
Lal1g0555 1191 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 146 195 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lal1g0555 1191 ProSiteProfiles Myosin motor domain profile. 199 861 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal1g0555 1191 Gene3D - 374 430 - -
Lal1g0555 1191 Gene3D Myosin VI head, motor domain, U50 subdomain 431 539 - -
Lal1g0555 1191 PRINTS Myosin heavy chain signature 229 248 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal1g0555 1191 PRINTS Myosin heavy chain signature 283 308 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal1g0555 1191 PRINTS Myosin heavy chain signature 326 353 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal1g0555 1191 PRINTS Myosin heavy chain signature 550 578 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal1g0555 1191 PRINTS Myosin heavy chain signature 603 631 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal1g0555 1191 ProSiteProfiles IQ motif profile. 887 915 IPR000048 GO:0005515
Lal1g0555 1191 Pfam IQ calmodulin-binding motif 890 906 IPR000048 GO:0005515
Lal1g0555 1191 Pfam IQ calmodulin-binding motif 925 941 IPR000048 GO:0005515
Lal1g0555 1191 MobiDBLite consensus disorder prediction 18 38 - -
Lal1g0555 1191 Coils Coil 973 1028 - -
Lal1g0555 1191 ProSiteProfiles IQ motif profile. 923 952 IPR000048 GO:0005515
Lal1g0555 1191 CDD MYSc_Myo8 213 849 IPR036022 -
Lal1g0555 1191 MobiDBLite consensus disorder prediction 1171 1191 - -
Lal1g0555 1191 MobiDBLite consensus disorder prediction 73 93 - -
Lal1g0555 1191 Pfam Myosin head (motor domain) 201 849 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal1g0555 1191 PANTHER MYOSIN 37 1190 - -
Lal1g0555 1191 Gene3D - 795 906 - -
Lal1g0555 1191 Gene3D Kinesin motor domain 198 794 IPR036961 -
Lal1g0555 1191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 907 IPR027417 -
Lal1g0555 1191 MobiDBLite consensus disorder prediction 1 93 - -
Lal1g0555 1191 PANTHER MYOSIN-2 ISOFORM X1 37 1190 - -
Lal1g0555 1191 SMART iq_5 922 944 IPR000048 GO:0005515
Lal1g0555 1191 SMART iq_5 885 907 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0555 Lal-Chr1 3582578 3595020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0555 1 1186 Myosins gene family AT5G54280 58.259 0.0 1381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0555 K10357 - gmx:100802074 1592.02