Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0552 ATGGAGCGATGCGAGCTGTGTGAGGAGAAGGCAATGGTGCAATGTGATTCGTACCAGGCTAAGCTATGTTGGCATTGCGATGCCAAAGTTAATAGTGCAAATTTCTTAGTGACGAAACACATTAAGGTTCTTCTATGTCGTATATGTAATTCTCATCATACTCAATGGAAAGCTTGTGGTCCCAAACTCATTCCCTCTACTTCATTCTGTCACCATTGTGTGGCAAATGGAAGGACCAGATTACAGCACAATGAAGTAGATAATGGTGGAGGGTATATTTCTGATGATGATGAATCGGATACTAGTGATGATGAAAAAGAGGATGATGATGATGAAGAAGAGAACCAGGTGGTGCCAATGTACACTCCTTTGTCACATGATTCTACTATTTCAGAATTGAAGAGAGAACGAAATAACTCACTTTCCATCCAACCCAAGGTAGGTTGCATGTATTTTAATGGAAGTGCATAG 471 0.4055 MERCELCEEKAMVQCDSYQAKLCWHCDAKVNSANFLVTKHIKVLLCRICNSHHTQWKACGPKLIPSTSFCHHCVANGRTRLQHNEVDNGGGYISDDDESDTSDDEKEDDDDEEENQVVPMYTPLSHDSTISELKRERNNSLSIQPKVGCMYFNGSA 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0552 156 MobiDBLite consensus disorder prediction 91 116 - -
Lal1g0552 156 MobiDBLite consensus disorder prediction 82 137 - -
Lal1g0552 156 PANTHER OS08G0178800 PROTEIN 1 133 - -
Lal1g0552 156 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0552 Lal-Chr1 3571170 3571640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0552 2 75 C2C2-CO-like Transcription Factor Family AT5G54470 54.054 5.36e-21 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0552 - - lang:109355125 171.014
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0552 1 3571170 3571640 Lal2g0550 2 3320262 3320873 LSH
Lal1g0552 1 3571170 3571640 Lal9g0484 9 3258023 3258749 LSH