Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0551 ATGGCAGATGATAATCAATTTCAAGCAAGTGGAAACTGGTGGGAATCATCAAGGAACATGAGGTTTGAAAGTGTGGATCAATCACAGTCTTACTCATCTACTGGACTCTCCAACATAGGCAAATTTTGTTGGCAAGAACAACAACTACATGGCATGTTGGTAGATCACATGAAATCAAAGTGTAATTCTTCCATGGAAGGAGAAACTACCTCTGTGCAAGTTTACCATGATAAGCTTCAACAACAACAAGATTCTTGTGTCACCAATGACCCGAACATGCATATGATGGATTTGGGACCTTCATCTCAAGCCATGGATTGGAATCAAACATCTTTGCTAAGAGGTGAGAAAGCTTCAGAGAGCAGCTTTAGGACTATGCTGCAAAAGAACTTGAGTTCATCAAACACAAATTTTCAGCATCAAAATAGGATTGGTTTATCTCAACAAGTTCAATGCAGACCAGAACCTTCAACCAATGAAATCAAACAAGTGAATAGAGGTTTCTCTTTGGATCAAACTCAGTTTAGTCCTCAATATAGCTCTGGGTATAATAACGTAACAAGCCAAGGTATATCATCTACTTTTAACACGGATCATTACCCTTCAATGTTACAAGGACTTTTAGCACATGAAAGCAATCAACAACCACAACAAGGCTCATTTAAGAATCGACCCATGAGTTTTCCATATTCAGCAACTTATGGCTTGAACTCTAACGAGTTAATACCTTCTTGGTCTACTTCTAAAATTCCTGAGTTCTTGAGAGCTTCACCCCCAAAACAACCGATTAATAGTAACCAGTTGCATTTCACCAACAACGCACCATTTTGGAACGCTTCTGAGGCTCCCATTAAAGATGCTCGATCTAACTTCTTCCCATCAATGCAGCACCCGTTTTCCACGCCAAATTTTGATGTACAATCAAAGAATATATCTGAAGTTAGGGACTCGGGTGCTGTTGTGAAGAAAAGTGAGAGTGGGCCTCCACCGAAAAGGCACAGGATTGAAACCCCATTGCCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACAGAATCACTACACTACAACAATTGGTTACGCCTTTTGGGAAGACTGATACAGCCTCAGTGCTATCTGAAGCCACTGAATACATCAAATATCTTCATGAACAAGTGACGGTTTTAAGCACCCCATATATGAAAGGTGGAATTCCCACACAGCATCAACAGAATTCTGGTAAATCTAAGGAAGCTGAGGATCCAAAGCAGGATCTTAGAAGCAAAGGACTAGGTTTGGTCCCAGTTTCTAGTACATTTCCAGTGACTCATGAACCCACAATTGATTTTTGGACACCAACATTTGGAGGAAGTTACAGATAA 1368 0.4042 MADDNQFQASGNWWESSRNMRFESVDQSQSYSSTGLSNIGKFCWQEQQLHGMLVDHMKSKCNSSMEGETTSVQVYHDKLQQQQDSCVTNDPNMHMMDLGPSSQAMDWNQTSLLRGEKASESSFRTMLQKNLSSSNTNFQHQNRIGLSQQVQCRPEPSTNEIKQVNRGFSLDQTQFSPQYSSGYNNVTSQGISSTFNTDHYPSMLQGLLAHESNQQPQQGSFKNRPMSFPYSATYGLNSNELIPSWSTSKIPEFLRASPPKQPINSNQLHFTNNAPFWNASEAPIKDARSNFFPSMQHPFSTPNFDVQSKNISEVRDSGAVVKKSESGPPPKRHRIETPLPLPAFKVRKEKMGDRITTLQQLVTPFGKTDTASVLSEATEYIKYLHEQVTVLSTPYMKGGIPTQHQQNSGKSKEAEDPKQDLRSKGLGLVPVSSTFPVTHEPTIDFWTPTFGGSYR 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0551 455 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 345 397 IPR036638 GO:0046983
Lal1g0551 455 MobiDBLite consensus disorder prediction 395 425 - -
Lal1g0551 455 Gene3D - 345 391 IPR036638 GO:0046983
Lal1g0551 455 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 9 444 - -
Lal1g0551 455 MobiDBLite consensus disorder prediction 315 336 - -
Lal1g0551 455 CDD bHLH_AtbHLH_like 341 392 IPR045239 -
Lal1g0551 455 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 335 384 IPR011598 GO:0046983
Lal1g0551 455 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 9 444 - -
Lal1g0551 455 MobiDBLite consensus disorder prediction 316 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0551 Lal-Chr1 3567366 3570614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0551 114 455 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 42.132 1.12e-68 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0551 - - lang:109352127 749.584