Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0543 ATGTTTGAATCCATAATGAATGCTTACTCAGAAAGTTTGGTTTTTGATCTTAGAATTCTAAGTTTTCATCCGAAACCCGTGGTGGCCTTTGTTGAATTTGCGTCTGCAAGGGCAGTGATCGTGGTATTAGAAGAGGAATTGAATTGGGTTGATGCAGCATTCAGCAAAAAACTACTTGATCCTGGGTTGTTTGATGAACACACGGTGAAGGTACCATGGACTACTTGCTCGGAAGATTTGATTCATTTAAAGAAAGAGGTTGAAAATCATGATTCTCCCCTGTTGCTGGCATCATCTGATAGAACCAATAAAATTACTTGTGATATTCGAATATTAGTGCGAGCAGACATCCATAATCTTATTAACGATCACCAGCCTCCATTGAGGGAAAAAGTTATCCATTGTTTAAGAAAGAAATATCTTCCATTACGTATCTCGGGAGAAGAGGATGATTCAAAGATTTTGCATTTTGCTTACATGAGATCATCTTTTTCCACATCCAGTGCTGCTAGAAAAAATGTAGGCCGTGTTTTGCTTCAGCACATATCAGAAGCACCTAGTTCAGGCCCTGCAGTTCAATCACCAACACCCAGTTTTACACCATTGATTGAAACCACTCCAGCCCCATCACCAGCTCATACTAGACATTCGTATCCTTGGTTTCAATCACCGGCATTCTTCCCGAAACTGACACCACCACCTGCTGGTCCCTCTCCTCCTCCATTTTATGTCACTTATAAACAACCAGAGAAGCATAGTAATAAAACAAAAGTTGTTCTCTCTGTAGTTTTAACTGCATCTGTGACATTAATAGCTGCAATAATGTCCTTTCTCTTCTGTAGACGGTTTAATAAGACTCACCAAAATAGACAAAATGATGGAAGGCCCCGTTTCAATTCGAGCACAAATGGCCACTCTGTTGATTCTCCTTATCATTGTATTGGAAATCCAGTAAAAAGGGAGAAACCTGAGATTCAGTCATTCAATAATAACTTCATAGGCAACAGCAACAATAATATTATAGGTGGATCACCATTTGAATTACCACCTCCTCCCGGAACCATCCCTTCTGTAATGCCTCCTTTAAAACTTCCTCCTGGCAGGATGAAATCTCTTTCTTCTGAACAATCTTTGTTTAGACCTTCTGGTAATGCTGGTGCTGGTGCTGGTGCTGGTGCTGGTGCTCCTCCCTCTGCTCCTCAACAACCTGGTCCTCCACCACCACCCCCTGCACCAGGTGGTGCCAAACATGGTCCTCCTCCTCCGCCTCCTAAGGGTGGTATACTTCCTCGACCTCCATCCCTTAGTAGAAGAAAAACCACTGGGAATGTTGAATCTAGCTCAGAAAATGAAGCTGGTGCTCCTAAAACCAAGCTAAAGCCTTTTTTCTGGGATAAGGTTCAAGCTAACCCAGACCATTCAATGGTTTGGGATCATGTCAAAACAGGATCATTCCAGTTTAGTGAAGAGATGATACAGACACTTTTTGAATATAATTCTGTGGATAACAATAAGCGAAAAAAAGGGTCTACCTCTCTAGAAGATCCACCTCAATATATCCAGATTATTGACAAAAGGAAGGCTCAAAATTTATTAATTCTACTGCGAGCGTTGAATGTGTCAATGGAAGAAGTTTGTGATGCACTTTATGAAGGAAATGAGCTACCCTGTGAATTCCTTCAAACCTTGCTGAAGATGGCACCAACATCAGATGAAGAACTTAAGCTTAAACAGTTTAATGGTGAGCTATCTCAACTTGCGCCTGCTGACCGGTTCCTGAAAATCCTGGTTGACATTCCATTCGCTTTTAAGCGAATGGAAGCACTGGTTTTCATGATAACACTTAAAGAGGAGCTCAATTCTACTACGGAGTCTCTTGCAACTTTAGAGGTTGCTTGTAAGGAACTAAGAAGCAGCCGGCTATTCCTCAAGCTTCTTGAAGCAGTTCTGAAAACTGGCAACCGTATGAATGATGGAACATACCGTGGTGGTGCACAAGCATTTAAACTTGACACACTTCTGAAATTATCTGATGTGAAAGGAACAGATGGCAATACTACACTCTTACACTTCGTTGTTCAAGAGGTTATCCGCTCCGAGGGCAAAAAAACTGATCGAGAAACTGAAGAGAGCCAGAGTATATCAAGTATTAAAACAGATGATGAAACAGAAGATTACTATAATGAAATTGGTCTTCAGGTGGTTTCAAACTTGAGCAGTGAACTCGAGAATGTGAAGAAAGCAGCAGTTCTAGATGCTGAGAGCATAAGAGGAGGTGCTGCCAAACTTAGCCATGGTCTGATAAAAACCAGAGACTTGGTAGAGAAAAACCTGAAGAATTTGGAGGAAGTTAGGGGGTTTTGCGAGACAGTGGAAAGTTTCGTGGAAAGTATTGAGGATGATATCATGACACTGCTGGAAGAAGAGAAGAAAATCATGGCTCTGGTGAAGAAAACTGGTGATTACTTTCATGGAAAAGCTGGGAAGGATGAAGGTTTGCGCTTGTTTGTAATAGTAAGGGACTTCTTGATTATGTTGGACAGGGTATGCAAGGAAGTAAGAGATACACATAAGAAGCTAACTAAAACTTTAAAACAAGGGACTTCTCGAGGAACATCATCCGGAGCATCATCACCTGGAACTCGTACAACCGGAACTCGCACACCGATTTCTGATTACAGAAAACGCCTTTTTCCAGCAATTGCGGAAAGGAGGATCGGTGACACTAGTTCAGATGAGGATAGTCCATAG 2751 0.4162 MFESIMNAYSESLVFDLRILSFHPKPVVAFVEFASARAVIVVLEEELNWVDAAFSKKLLDPGLFDEHTVKVPWTTCSEDLIHLKKEVENHDSPLLLASSDRTNKITCDIRILVRADIHNLINDHQPPLREKVIHCLRKKYLPLRISGEEDDSKILHFAYMRSSFSTSSAARKNVGRVLLQHISEAPSSGPAVQSPTPSFTPLIETTPAPSPAHTRHSYPWFQSPAFFPKLTPPPAGPSPPPFYVTYKQPEKHSNKTKVVLSVVLTASVTLIAAIMSFLFCRRFNKTHQNRQNDGRPRFNSSTNGHSVDSPYHCIGNPVKREKPEIQSFNNNFIGNSNNNIIGGSPFELPPPPGTIPSVMPPLKLPPGRMKSLSSEQSLFRPSGNAGAGAGAGAGAPPSAPQQPGPPPPPPAPGGAKHGPPPPPPKGGILPRPPSLSRRKTTGNVESSSENEAGAPKTKLKPFFWDKVQANPDHSMVWDHVKTGSFQFSEEMIQTLFEYNSVDNNKRKKGSTSLEDPPQYIQIIDKRKAQNLLILLRALNVSMEEVCDALYEGNELPCEFLQTLLKMAPTSDEELKLKQFNGELSQLAPADRFLKILVDIPFAFKRMEALVFMITLKEELNSTTESLATLEVACKELRSSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGNTTLLHFVVQEVIRSEGKKTDRETEESQSISSIKTDDETEDYYNEIGLQVVSNLSSELENVKKAAVLDAESIRGGAAKLSHGLIKTRDLVEKNLKNLEEVRGFCETVESFVESIEDDIMTLLEEEKKIMALVKKTGDYFHGKAGKDEGLRLFVIVRDFLIMLDRVCKEVRDTHKKLTKTLKQGTSRGTSSGASSPGTRTTGTRTPISDYRKRLFPAIAERRIGDTSSDEDSP 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0543 916 ProSiteProfiles Formin homology-2 (FH2) domain profile. 449 872 IPR015425 -
Lal1g0543 916 MobiDBLite consensus disorder prediction 897 916 - -
Lal1g0543 916 SUPERFAMILY Formin homology 2 domain (FH2 domain) 405 862 - -
Lal1g0543 916 MobiDBLite consensus disorder prediction 436 453 - -
Lal1g0543 916 Pfam Formin Homology 2 Domain 453 846 IPR015425 -
Lal1g0543 916 MobiDBLite consensus disorder prediction 293 309 - -
Lal1g0543 916 PANTHER FORMIN-RELATED 406 914 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lal1g0543 916 PANTHER FORMIN-RELATED 42 433 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lal1g0543 916 MobiDBLite consensus disorder prediction 345 363 - -
Lal1g0543 916 MobiDBLite consensus disorder prediction 398 430 - -
Lal1g0543 916 MobiDBLite consensus disorder prediction 865 890 - -
Lal1g0543 916 MobiDBLite consensus disorder prediction 861 916 - -
Lal1g0543 916 MobiDBLite consensus disorder prediction 288 317 - -
Lal1g0543 916 PANTHER FORMIN-LIKE PROTEIN 406 914 - -
Lal1g0543 916 PANTHER FORMIN-LIKE PROTEIN 42 433 - -
Lal1g0543 916 SMART it6_source 449 861 IPR015425 -
Lal1g0543 916 Gene3D Formin, FH2 domain 454 873 IPR042201 -
Lal1g0543 916 MobiDBLite consensus disorder prediction 343 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0543 Lal-Chr1 3492158 3499401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0543 430 906 FH2 protein (formin) Gene Family AT5G54650 60.905 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0543 - - lang:109363222 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0543 1 3492158 3499401 Lal1g0543 1 3492158 3499401 ECH
Lal1g0543 1 3492158 3499401 Lal2g0432 2 2581310 2588092 LSH
Lal10g0643 10 14266192 14272049 Lal1g0543 1 3492158 3499401 PCT
Lal1g0543 1 3492158 3499401 Lal10g0643 10 14266192 14272049 PCT