Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0541 ATGGTCACCAAAAACCATAACCGGCATTCATTTTCATTCACATCAACCCCTTCAAAGTTATATATTTTCTTTACTTTTCTCTTGAGGTTTCAGAACTATGTGGGTGATGAACTTTTCATAGATCAAGAGAAACCAGTTGGAAGTGAAAAAATGGTGGAGACTCCATCTAATGGAAGAGCAAGGCTAGCTTTTCCAATTGTAAATGGTGGACATGATGTTAGCCCAAGTAGTGCTCCACCAAGCAATGCTGGATCAGATTATAGTATAATCGAGTTCACAAGAGAGGATGTAGAAGCATTGTTAAATGAGAAAGCCAAAAGAAAGGACAGATTTAATTACAAGGAAAGATGTGAAAATATGATGGACTATATAAGAAGGCTTAAGGTTTGCATTAGATGGTTCCAAGACCTTGAGATGAACTACTCACTAGAGCAGGAAAGGTTAAAGAATTCATTGGAATTAACCCAACAGAAATGCATAGAAATTGAGTTGCTGCTTAAAATCAAGGAAGAAGAACTAAATTCAATTATCACAGAAATGAGAAGGAATTGCGCTTCTTTGCAAGAGAAATTGATCAAGGAAGAATCGGAAAGGGCGGTTGCAGTAGAATCTCTTGAAAAAGAGAGGGAGGCTAGGCTTAACATTGAGAGGTCACAGACTACTCTATCTGAGGATCTTAGCAGAGCTCAAAGAGAGATCCAAAATGCAAATCAGAAGATATCATCACTCAATGACATGTATAAACGGTTACAGGATTACATAACAAGCTTACAACAATACAATGGAAAGCTACATACAGAGCTTTCATCAGTTGAAGATGAACTTAAACGCATAGAGAAAGAGAAGGTTGCTGCTCTGGAGAACATCACCATGTTAAGGAGTCAACTTACCTTATCCATTTCTTCTCAAGATGAGGCCATAAAACACAAGGAAACTCTGGCTAATGAAGTTGCTTCTCTTAGAGGAGAATTGCAACAAGTAAGGGATGAACGAGACCGCCAACTATCTCAAGTGCAAAGTTTAACTTTTGAATTAGAGAAATTAAAAGAATCCACAGAAAGCTCCTGCACTGAACTGGACAATTTGACACTAAAAGCAAGTGAACTAGAGGCAAAATGTTCCTTAAAAGATAATCAGATAAGAGAATTGCAAGAGCAGCTAGCAATTGCAGAGAAGAAACTTCAGGTGCTTGATATGTCTGCATTTGAGACAAGGACGGAATTTGAAGGACAGCAGAAATTTGTAAATGAGTTACAAAGACGTGTTGCAGATGCAGAATATAAACTTATAGAAGGGGAGAGGCTGCGGAAAAAATTACATAATACCATTTTGGAACTAAAAGGGAACATCCGCGTATTCTGTCGAGTGAGGCCTTTGTTGCCTGATGAAATTTGTAGCACAGAAGGCAAGATTTTCAGTTATCCAACATCCATGGAAGCTTCTGGACGAGACATCGATCTAACCCAAAGTGGCCAAAAACATTCTTTTACATTTGATAAAGTTTTTACACCAGAGGCAACACAAGAAGACGTTTTTGTAGAAATTTCACAGCTAGTACAAAGTGCTCTGGATGGTTATAAGGTTTGCATCTTTGCCTACGGTCAGACTGGCTCGGGGAAAACCTATACAATGATGGGAAGGCCGGGACATCCAGAGGAAAAGGGCTTGATACCTCGTTCGCTAGAACAAATATTTCAAGCAAAGCAATCTCAACAACCTCATGGTTGGAAATATGAAATGCAGGTGTCAATGTTGGAAATATACAATGAAACCATTCGTGATCTGTTATCTTCAAATAGATTATCATCAGATGCAACTCGCTTAGAAAATGGTACTCCCGGAAAACAATACACGATCAAACATGATGCAAGTGGAAATACACACGTTTCTGATCTTACAGTAGTGGATGTTAAGAGTATTAAAGAGGTCGGATTTCTTTTAAATCAAGCTGCAAATAGCAGATCAGTGGGAAAGACTCAGATGAACGAACAATCGTCGAGAAGCCATTTCGTATTCACTCTTCGAATATATGGTGTAAATGAGAGCACTGACCAACAAGTACAAAGCATTTTGAATCTTATCGATCTTGCTGGTAGCGAGCGTCTTTCAAAGAGTGGATCAACCGGGGACAGGTTGAAAGAAACTCAAGCGATCAACAAAAGTTTGTCATCACTGAGTGATGTTATATTTGCCTTGGCCAAGAAGGAAGATCATGTTCCTTTCAGGAACTCAAAACTAACATATCTACTTCAGCCTTGTCTAGGTGGTGACTCGAAGACGTTAATGTTCGTAAACATCTCACCCGATCCTAATTCAGTTGGCGAGTCACTATGCTCACTCAGGTTTGCATCTAGAGTAAATGCTTGCGAGATTGGAACACCGCGTCGTCAAACCAACTGGCGTTCAACAGACTCTCGCTTGAGCTATTTCTAA 2433 0.3933 MVTKNHNRHSFSFTSTPSKLYIFFTFLLRFQNYVGDELFIDQEKPVGSEKMVETPSNGRARLAFPIVNGGHDVSPSSAPPSNAGSDYSIIEFTREDVEALLNEKAKRKDRFNYKERCENMMDYIRRLKVCIRWFQDLEMNYSLEQERLKNSLELTQQKCIEIELLLKIKEEELNSIITEMRRNCASLQEKLIKEESERAVAVESLEKEREARLNIERSQTTLSEDLSRAQREIQNANQKISSLNDMYKRLQDYITSLQQYNGKLHTELSSVEDELKRIEKEKVAALENITMLRSQLTLSISSQDEAIKHKETLANEVASLRGELQQVRDERDRQLSQVQSLTFELEKLKESTESSCTELDNLTLKASELEAKCSLKDNQIRELQEQLAIAEKKLQVLDMSAFETRTEFEGQQKFVNELQRRVADAEYKLIEGERLRKKLHNTILELKGNIRVFCRVRPLLPDEICSTEGKIFSYPTSMEASGRDIDLTQSGQKHSFTFDKVFTPEATQEDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQAKQSQQPHGWKYEMQVSMLEIYNETIRDLLSSNRLSSDATRLENGTPGKQYTIKHDASGNTHVSDLTVVDVKSIKEVGFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQSILNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPNSVGESLCSLRFASRVNACEIGTPRRQTNWRSTDSRLSYF 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0541 810 Coils Coil 310 337 - -
Lal1g0541 810 Coils Coil 415 435 - -
Lal1g0541 810 CDD KISc_C_terminal 447 791 - -
Lal1g0541 810 Coils Coil 170 197 - -
Lal1g0541 810 PANTHER KINESIN-LIKE PROTEIN KLP-3 45 809 - -
Lal1g0541 810 Coils Coil 261 295 - -
Lal1g0541 810 PANTHER KINESIN-LIKE PROTEIN 45 809 - -
Lal1g0541 810 PRINTS Kinesin heavy chain signature 525 546 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal1g0541 810 PRINTS Kinesin heavy chain signature 659 676 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal1g0541 810 PRINTS Kinesin heavy chain signature 690 708 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal1g0541 810 PRINTS Kinesin heavy chain signature 739 760 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal1g0541 810 ProSiteProfiles Kinesin motor domain profile. 449 789 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal1g0541 810 Gene3D Kinesin motor domain 390 791 IPR036961 -
Lal1g0541 810 Pfam Kinesin motor domain 455 787 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal1g0541 810 Coils Coil 359 400 - -
Lal1g0541 810 SMART kinesin_4 447 797 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal1g0541 810 Coils Coil 90 110 - -
Lal1g0541 810 Coils Coil 219 253 - -
Lal1g0541 810 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 408 787 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0541 Lal-Chr1 3471433 3477381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0541 421 786 Calmodulin-binding Proteins AT5G65930 40.217 1.80e-77 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0541 K10405 - gmx:100784221 1285.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0541 1 3471433 3477381 Lal1g0541 1 3471433 3477381 ECH
Lal1g0541 1 3471433 3477381 Lal9g0471 9 3126849 3132363 LSH
Lal10g0645 10 14286143 14294996 Lal1g0541 1 3471433 3477381 PCT
Lal8g0868 8 6305841 6312859 Lal1g0541 1 3471433 3477381 PCT
Lal1g0541 1 3471433 3477381 Lal10g0645 10 14286143 14294996 PCT
Lal1g0541 1 3471433 3477381 Lal8g0868 8 6305841 6312859 PCT