Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0525 ATGCGTCCACCACTGAAGAAAATCGATTTCTTTCGAGGAGACACTGTTGAAGTGTGTAGCAATGAACCTGGTTTTCTTGGCTCATACTACGAGGCCAACATCGTGTCACGTCTTGATAATGGTCTCTACGTGGTTTGTTACAAGAACCTTCTAGAAGATGATGAATCAAAGCCATTGACAGAGACTATTTACCCTAAAGAGCTTCGTCCATTTCCACCAAAGATTCATGCTACCCAATTTTCCCTTTACCAAAAGGTCGATGCTTTCGACAACGATGGTTGGTGGGTCGGTGAAATCACGGGTAGAAGTAGTTCTTACTATTTCGTTTATTTCGCTTCAACGAATGAAGAAATAGTGTATCATTGTTCTAAGATAAGGGTGCATCAAGAATGGGTTAATGCGGAATGGGTTTAA 414 0.413 MRPPLKKIDFFRGDTVEVCSNEPGFLGSYYEANIVSRLDNGLYVVCYKNLLEDDESKPLTETIYPKELRPFPPKIHATQFSLYQKVDAFDNDGWWVGEITGRSSSYYFVYFASTNEEIVYHCSKIRVHQEWVNAEWV 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0525 137 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 8 136 - -
Lal1g0525 137 Pfam Agenet domain 13 73 IPR008395 -
Lal1g0525 137 PANTHER - 8 136 - -
Lal1g0525 137 SMART agenet_At_2 78 133 IPR014002 -
Lal1g0525 137 SMART agenet_At_2 8 76 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0525 Lal-Chr1 3364050 3364463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0525 20 134 PHD Transcription Factor Family AT5G58610 28.467 6.76e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0525 - - gmx:106794115 204.912