Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0516 ATGGCACAATTGCCACCAAAGATTCCAAACATGCCACCTAGTTGGCCTGAATTCTCTTGTCACCAAAAGATACCTTCTGTCAAAAGCATGCCACCAAATGCTGCAAACAATAACCATCAAGATCATCCTCAACAACAACAACAAAACAACCCTACATGGGTGGATGAGTTCTTGGACTACTCTTCAGCTAGGCGTGGGGCCCACCGGCGGTCGGCGAGTGACTCCATCACCTTCATGGAAGCACCAAAGGGTGATGATCACAATGAGTTTGAGAGGTTTGATGATGCACAATTCTTGTCCATGTTCAATGATGAGGTTTCAGGGAATAATCATATATTGATGCCACCAACAACATTGTCTACCTCAAACCCTTCAAGCCCTTCTGATCATAACAGCATCAATGATGATCATAAAGAGAAAACAAAACAGGAGCATGAGAAGGAGAAGAAGGAGCAGCATCAGAAGAAGCAATTCAAGAATGAATCAGAGGATGAGGATGAAAGCCAATGCAAACAGGAAATCACAGAAGGTCTCAATAATAATGCAAATGCAACAACTTGCTCCAATGACAGAATTACTGACCCTAAGAGGGTGAAAAGAATCTTGGCAAATAGACAATCTGCACAAAGATCTAGAGTGAGGAAACTGCAGTACATATCAGAACTTGAACGAAGTGTAACTTCATTACAGACCGAAGTTTCAGTACTGTCTCCAAGGGTTGCATTTTTGGATCATCAACGTTTGCTTCTAAATGTAGACAACAGTGCTCTCAAGCAAAGAATCGCAGCCTTGGCCCAAGACAAGATCTTCAAAGATGCACATCAAGAGGCATTGAAAAGGGAGATAGAGAGACTAAGGCAAGTGTACCACCAACAAAACATCAAGAAGATGGACAATACTACTGCAGGGTCACCATCCCAATCACCAAAACCAAGGTGTGATACTCACACTGAAAAGGAACAACTTATCAATGTTTGA 978 0.4233 MAQLPPKIPNMPPSWPEFSCHQKIPSVKSMPPNAANNNHQDHPQQQQQNNPTWVDEFLDYSSARRGAHRRSASDSITFMEAPKGDDHNEFERFDDAQFLSMFNDEVSGNNHILMPPTTLSTSNPSSPSDHNSINDDHKEKTKQEHEKEKKEQHQKKQFKNESEDEDESQCKQEITEGLNNNANATTCSNDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNIKKMDNTTAGSPSQSPKPRCDTHTEKEQLINV 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0516 325 MobiDBLite consensus disorder prediction 131 166 - -
Lal1g0516 325 Coils Coil 142 162 - -
Lal1g0516 325 Coils Coil 275 295 - -
Lal1g0516 325 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 199 214 IPR004827 GO:0003700|GO:0006355
Lal1g0516 325 MobiDBLite consensus disorder prediction 293 311 - -
Lal1g0516 325 MobiDBLite consensus disorder prediction 29 56 - -
Lal1g0516 325 SUPERFAMILY Leucine zipper domain 196 250 IPR046347 GO:0003700|GO:0006355
Lal1g0516 325 MobiDBLite consensus disorder prediction 1 88 - -
Lal1g0516 325 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 194 246 IPR004827 GO:0003700|GO:0006355
Lal1g0516 325 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 322 - -
Lal1g0516 325 MobiDBLite consensus disorder prediction 109 191 - -
Lal1g0516 325 MobiDBLite consensus disorder prediction 173 191 - -
Lal1g0516 325 CDD bZIP_plant_RF2 197 247 IPR044759 GO:0003700|GO:0006355
Lal1g0516 325 MobiDBLite consensus disorder prediction 293 325 - -
Lal1g0516 325 Pfam bZIP transcription factor 196 240 IPR004827 GO:0003700|GO:0006355
Lal1g0516 325 SMART brlzneu 192 256 IPR004827 GO:0003700|GO:0006355
Lal1g0516 325 Gene3D - 195 293 - -
Lal1g0516 325 MobiDBLite consensus disorder prediction 109 130 - -
Lal1g0516 325 PANTHER BASIC LEUCINE ZIPPER 34 1 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0516 Lal-Chr1 3318543 3323207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0516 1 273 bZIP Transcription Factor Family AT3G58120 59.107 1.77e-99 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal1g0516 bZIP_2 4.6e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0516 - - lang:109363232 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0516 1 3318543 3323207 Lal1g0516 1 3318543 3323207 ECH