Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0513 ATGATGAAAGATAATTCCAAGAACAAATGTGGGGCATCTTCTCATCAATCCATGAAAGAGAAGGAAAAACACTTGGTGGAAAAAATTCAAGCAATTTTAACCGATCTTCAATCGGCAAGAAAGGAAAACAGGGCTAATGACATTGTCATCTTTGAGGAACAGATGGCTCAGCTGCTAAACGAGTGGAAAGCCGAACTGGAGTCTCCTGCCACCTCCTTTGCTAAAGTTTTCCCTGCCATCATAATAGATGCTGGTATTCTGCAGGATGGAAGCCTTGATTCATTTGCCGCTCAACTATTGCAAGCAATTGAGGACAAAGATGATGCAACTAGTCCACTAATGAAGACTGATCTCCATCTAGATAACATTGATGATAGCAATTATTCATTTTTACAGGAGAAGTGTTTTGATGATAACCAACTAGTGGATCATACTTTTGTAGGCTCTGCTTCTACCATCTACAACACTGCTTTTAGTAACTCATATATGACTCAGCTGGATTATCATCCATTCGCTTTAAATCAAAGTTTGGATCACAGCATAATAGGTCATGACTCTGATTTGATTGGTCAGATTGATTTTAAACAGCACCACAACCCAGAAATTAAGAACTCAAATTCAACTGAATTTTTATTTGTTGAAGACTTTGATTGCGGCCAATTTTTTGGAGAAGATGACGCCACAAACAATGGGGAGGAAGTTATTCCTAACATCCTTCCAAATATCTGTCCTCCACCTTCTGCCTTCTTAGCCCCAAAGTGTGCACTGTGGGACTGTTTCAGACCCGCTCAAGGGTTAACATGTTGCCTGGACTATTGTAGCAGTGGTCATGAGCTTTTGGCAAACAATGAGGGTCTTCCAGGCACGACTCCAATTTTGCGACCTGGGGGCATTGAAGTAAAAGATGGTCCTTTGTTTGCTGCTGTTCGTGCAAAGACACAGGGAAAGGAAGTGGGCATACCTAAATGTGAAGGTGCTGCTTCAACTAAATCTCCTTGGAATGCTCCTGGTGAGTATGCAATAGAATTATTTGACCTTTGTTTTCTTGAGGGTGAAACTTTAAGGGAGTGGCTCTTCTTTGACAAGCCTAGAAGGGCATTTGAAAGTGGAAACAGAAAACAGAGATCACTCCCAGATTACAATGGGCGTGGTTGGCATGAGTCAAGGAAACAAGTGATGAAGGAACATGGGGGACTAAAGAGGTCTTATTACATGGATCCCCAACCTCTTAGTTATCTTGAGTGGCATTTATATGAGTACGAGGTCAATAGCCATGATGGTTGTGCGTTATATAGACTAGAACTAAAGCTTGTGGATAAAAAGAAAAGTCCCAAAGGAAAATTGACTAAAGAATCTCTTACTGATTTACAAAACAAGATGGGAAAGCTAACTGCTGCTGTTATATCATCAAATGATGGATTAAATGTCAAGGGAAAAACAATGACCAAATTTGAGAATGTGGGACCTCCTGAAAATTAA 1479 0.4043 MMKDNSKNKCGASSHQSMKEKEKHLVEKIQAILTDLQSARKENRANDIVIFEEQMAQLLNEWKAELESPATSFAKVFPAIIIDAGILQDGSLDSFAAQLLQAIEDKDDATSPLMKTDLHLDNIDDSNYSFLQEKCFDDNQLVDHTFVGSASTIYNTAFSNSYMTQLDYHPFALNQSLDHSIIGHDSDLIGQIDFKQHHNPEIKNSNSTEFLFVEDFDCGQFFGEDDATNNGEEVIPNILPNICPPPSAFLAPKCALWDCFRPAQGLTCCLDYCSSGHELLANNEGLPGTTPILRPGGIEVKDGPLFAAVRAKTQGKEVGIPKCEGAASTKSPWNAPGEYAIELFDLCFLEGETLREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMKEHGGLKRSYYMDPQPLSYLEWHLYEYEVNSHDGCALYRLELKLVDKKKSPKGKLTKESLTDLQNKMGKLTAAVISSNDGLNVKGKTMTKFENVGPPEN 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0513 492 MobiDBLite consensus disorder prediction 1 20 - -
Lal1g0513 492 PANTHER TRANSCRIPTION FACTOR VOZ1 2 483 IPR039277 GO:0006355|GO:0048578
Lal1g0513 492 PANTHER TRANSCRIPTION FACTOR VOZ2 2 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0513 Lal-Chr1 3295749 3300356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0513 1 465 VOZ-9 Transcription Factor Family AT1G28520 49.272 1.08e-144 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Lal1g0513 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0513 - - gmx:100808629 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0513 1 3295749 3300356 Lal1g0513 1 3295749 3300356 ECH