Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0510 ATGGGTGTTTCAGGGAAGTGGATTAGAGCATTGGTTGGTCTAAAGAAATCAGAAAAGTCAGATTCTTCAGACAAAGATAGAAATGTCAGCAAGTTTCGGCATTGGAGAAAGAACTCCATCGAAATTGACAACTGTAAACTTCAAAATGAGTTTGGTGATGACAGTATGCCACCAATTGGCGACGGAGATGCCCATGCAAACTTTGATACCCGTGAAAATATTGATACTCATTACTCACCTTCTACTTCACAACAAGCACGGGATGCTACAAATAATCAGCAGATCACGAGAGAGGAATGGGCTGCAACATGCATTCAAACAGCATTTCGAGGATTCCTGGCCAGAAGAGCTCTACGAGCTTTGAAAGGATTGGTAAGGCTTCAGGCCCTTGTAAGGGGCCATGCAGTGAGAAAACAAGCAGCCATAACTCTCCGCTGTATGCAAGCTTTGGTGAGGGTTCAGGCTCGTTACAGGGCAAGGCGTGTTCGCTTGGCATTGGAAAGTGAAACTTCACAACATAAACTTCAGCAACAGCTTGTTAATGAAGCTTGTGTTCGAGAAACAGAAGGAGGTTGGTGTGACAGTGTGGGATCTGTTGAAGAAATTCAAGCCAAAATATTAAAGAGACAGGAGGCTGCAGCCAAACGTGAGAGAGCCATGGCATATGCTCTAGCTCATCAGTGGCAAGCGGGATCAAGGCAGCAGGCTATTGCCTCTGGATTTGAACCAGATAAAAGTTGTTGGGGTTGGAATCGGTTGGAAAGGTGGATGGCCGAACGTCCTTGGGAGATTCGCTTTCTTGACATTGATACGAGGGATAGAGTAACTGGAGATGAAAATGGAGCTATGGATGGAAAAAATGGAAGCAAGCCTCGGTTTAGATCTGCTAACACAAAACCAATTCCATCAAACAATCATCCAAACCTTGCTGATCAAAGAGCCGGTCCCTCTCTTTCTGATTGCTGTGATTCTTCACCTAGTATATCAGCAGGTTTTTTGGAGCCAGCAAGCACACAATCTGTTAACCCGAAGTATAATGCAAATGTTCAAAATTCTTTTGAAGTAGGCAACTCAAGACCTGAAATCAGGTCAAGGTCTCATAGTAATCCAAAGGAGAGAACTGCACAATTAGATAAACAGGCAAAAAAGCGACTATCTTTGCCTAACAATGGGGGAGGTCCCACTAGAACTAATGTGAAAGGGGCATGTGGCACACAAAAGCCTATAAGAGATAAACCTAAGCTCAATGGAGGTGAGAATGTGAATGTTACTAAAGCTGTTACCAACTCCACTATTATGTAG 1302 0.4378 MGVSGKWIRALVGLKKSEKSDSSDKDRNVSKFRHWRKNSIEIDNCKLQNEFGDDSMPPIGDGDAHANFDTRENIDTHYSPSTSQQARDATNNQQITREEWAATCIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARYRARRVRLALESETSQHKLQQQLVNEACVRETEGGWCDSVGSVEEIQAKILKRQEAAAKRERAMAYALAHQWQAGSRQQAIASGFEPDKSCWGWNRLERWMAERPWEIRFLDIDTRDRVTGDENGAMDGKNGSKPRFRSANTKPIPSNNHPNLADQRAGPSLSDCCDSSPSISAGFLEPASTQSVNPKYNANVQNSFEVGNSRPEIRSRSHSNPKERTAQLDKQAKKRLSLPNNGGGPTRTNVKGACGTQKPIRDKPKLNGGENVNVTKAVTNSTIM 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0510 433 MobiDBLite consensus disorder prediction 360 380 - -
Lal1g0510 433 ProSiteProfiles IQ motif profile. 147 174 IPR000048 GO:0005515
Lal1g0510 433 ProSiteProfiles IQ motif profile. 122 149 IPR000048 GO:0005515
Lal1g0510 433 MobiDBLite consensus disorder prediction 275 324 - -
Lal1g0510 433 MobiDBLite consensus disorder prediction 352 419 - -
Lal1g0510 433 SMART iq_5 97 119 IPR000048 GO:0005515
Lal1g0510 433 SMART iq_5 120 141 IPR000048 GO:0005515
Lal1g0510 433 PANTHER IQ-DOMAIN 5-RELATED 2 393 - -
Lal1g0510 433 ProSiteProfiles IQ motif profile. 98 126 IPR000048 GO:0005515
Lal1g0510 433 MobiDBLite consensus disorder prediction 291 324 - -
Lal1g0510 433 Pfam IQ calmodulin-binding motif 100 119 IPR000048 GO:0005515
Lal1g0510 433 MobiDBLite consensus disorder prediction 73 93 - -
Lal1g0510 433 PANTHER IQ-DOMAIN 5-RELATED 2 393 - -
Lal1g0510 433 Gene3D - 99 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0510 Lal-Chr1 3282600 3289260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0510 1 391 IQD Protein Family AT3G22190 57.576 1.36e-110 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0510 - - lang:109325503 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0510 1 3282600 3289260 Lal2g0359 2 2146153 2147589 LSH
Lal1g0510 1 3282600 3289260 Lal9g0336 9 2239372 2240372 LSH