Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0504 ATGTTTAACGGTATGATGGATCCTGAGATGTTCAGAATCGCTCAGGAACAGATGAGTCGCATGTCACCCGCTGAGTTAGCACGGATCCAACAACAGATGATGTCTAATCCAGAGCTTATGAGGATGGCCTCAGAAAGCATGAAGAACATGAGTTCTGAAGACTTTAAACTTGCTGCTGAACAGTTAAAGCATACACGCCCTGAAGAAATGGCTCAGATTGGTGAGAAGATGGCTAATGCAACACCTGATGAAGTAGCAGCTATGCGTGCCCGTGCTGATGCCCAGATCAAATATCAATTAGATGCAGCTGAGATATTGAAGAAACAGGGAAATGAACTTCATAGTCAGGGAAAGTTCAATAATGCTCTGCAGAAATATCGGCTTGCTAAGGAAAACATTAAAGAGATTCCACCTTTTCAAAGTAGAAAGCTTCTTTTGGCCTGCTCACTCAACTTGATGTCCTGTTACTTGAAGACAAGGCAGTATGAGGAATGCGTAAAAGAAGGTTCCGAGGTTTTGGCGTATGATGCCAAGAATCTTAAGGCTCTTTATCGAAGAGGTCAGGCGTACAAGGAACTAGGCCTACTAAATGATGCTGTTACCGATTTGAGCATGGCACTTGAAGTGGCCCCTGATGATGATACAATTGCAGAGCTTTTACGGGACACCAAGGAAATGTTGACAAATGGAGGTGGTGAACATGCACCCAGAGGTTTAGTAATTGAAGAAATAACTGAAGAAGTCGAGAGTGTGCCTTCTGAAAGCAACAAAAGCTCTTCTTTGAAACCAACAGTGGTTCAGCCAAAAAAATCTGGTGACAGTTCTCAGAGCAACAGTACAGTTAACAATGGAAATCCAAAAGCATATGGAGAGAGTTTAGATACATTGAAAAATGATCCAGAAGCTATCAGATCATTTCAAAACTTCATCTCAAATGCTGATCCTGCCACTCTGGCTTCTTTGAATCCCGGACAATCCAAAGATCTACCTCCGGAAATGATTAGAACTGCTTCAAATATGATTGGCAAGATGTCACCTGAGGAACTCCAAAAAATGCTTGGCATGGCTGCTTCATTTCAAGGAGACAACACTTTTGCCAGAGGTTCCCCTGATTCTCCGTTCAACCCTGGATCTATCCCTCCCAATGTGACACCTGATATGTTTAAAACAGCGAGTGATATGATAAGTAAAATGCCACCAAATGAGCTTCAGAAGATGTTTGAAATGGCATCCTCTTTGAAAGGGAAAGAATCTCCATCATCATCTGCTGTAGCCAAGGATGAAAGAAATGTTTCCCAGTCAAATATCCCATCCTCAAGTACTAGTGGAACTAATGCTTTTGGAGAATCAAGTTCTTTTCTCGATGCTTTTGCCAGAGGTTCCCCTGATTCTCCATTCAACCCTGGATCTATCCCTCCCAATGTGACACCTGATATGTTTAAAACAGCGAGTGATATGATAAGTAAAATGCCACCAGATGAGCTTCAGAAGATGTTTGAAATGGCATCCTCGTTGAAGGGGAAAGAATCTCCATCATCATCTGCTGTAGCCAAGGATGTAAGAAATGTTTCCCAGTCAAACTTCCCATCCTCAAGTACTAGTGGAACTAATGCTTTCGGAGAATCAAGTTCTTTTCTCGATGCTTTTTCAAATATGAGAAACGCTTCTCAGCCAAACTTCCCTTCCTCGAGTACTGATTTACAAGAACAAATGAGAAACCAGATGAAAGATCCTGCTATGCGGCAGATGTTCACATCAATGATTAAAAACATGAGCCCAGAAATGATGTCAAACATGGGTGAACAGTTTGGTGTCAAGCTTTCAAAAGAAGATGCAGAAAAAGCTCAGAAAGCCATGTCATCCTTTTCACCCGAGAGCTTGGATAAAATGATGCTTTGGGCAGACAGGGTTCAAAGAGGAGTTGAAGGTGTAAAAAAGACAAAGAACTGGTTGCTAGGGAAACCTGGCATTGCCTTAGCAATATTCATGCTCATTTTGGCTATCCTCCTTCACCGGTTGGGCTACATTGGTGGCTAG 2037 0.4227 MFNGMMDPEMFRIAQEQMSRMSPAELARIQQQMMSNPELMRMASESMKNMSSEDFKLAAEQLKHTRPEEMAQIGEKMANATPDEVAAMRARADAQIKYQLDAAEILKKQGNELHSQGKFNNALQKYRLAKENIKEIPPFQSRKLLLACSLNLMSCYLKTRQYEECVKEGSEVLAYDAKNLKALYRRGQAYKELGLLNDAVTDLSMALEVAPDDDTIAELLRDTKEMLTNGGGEHAPRGLVIEEITEEVESVPSESNKSSSLKPTVVQPKKSGDSSQSNSTVNNGNPKAYGESLDTLKNDPEAIRSFQNFISNADPATLASLNPGQSKDLPPEMIRTASNMIGKMSPEELQKMLGMAASFQGDNTFARGSPDSPFNPGSIPPNVTPDMFKTASDMISKMPPNELQKMFEMASSLKGKESPSSSAVAKDERNVSQSNIPSSSTSGTNAFGESSSFLDAFARGSPDSPFNPGSIPPNVTPDMFKTASDMISKMPPDELQKMFEMASSLKGKESPSSSAVAKDVRNVSQSNFPSSSTSGTNAFGESSSFLDAFSNMRNASQPNFPSSSTDLQEQMRNQMKDPAMRQMFTSMIKNMSPEMMSNMGEQFGVKLSKEDAEKAQKAMSSFSPESLDKMMLWADRVQRGVEGVKKTKNWLLGKPGIALAIFMLILAILLHRLGYIGG 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0504 678 MobiDBLite consensus disorder prediction 414 451 - -
Lal1g0504 678 PANTHER OUTER ENVELOPE PROTEIN 61 464 677 - -
Lal1g0504 678 PANTHER OUTER ENVELOPE PROTEIN 61 58 452 - -
Lal1g0504 678 MobiDBLite consensus disorder prediction 247 294 - -
Lal1g0504 678 SMART tpr_5 146 179 IPR019734 GO:0005515
Lal1g0504 678 SMART tpr_5 103 136 IPR019734 GO:0005515
Lal1g0504 678 SMART tpr_5 180 213 IPR019734 GO:0005515
Lal1g0504 678 MobiDBLite consensus disorder prediction 251 289 - -
Lal1g0504 678 SUPERFAMILY TPR-like 95 225 IPR011990 GO:0005515
Lal1g0504 678 MobiDBLite consensus disorder prediction 410 480 - -
Lal1g0504 678 Gene3D Tetratricopeptide repeat domain 89 230 IPR011990 GO:0005515
Lal1g0504 678 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 464 677 - -
Lal1g0504 678 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 58 452 - -
Lal1g0504 678 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0504 Lal-Chr1 3235483 3241538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0504 93 227 Calmodulin-binding Proteins AT5G48570 33.333 1.50e-15 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0504 - - cam:101514495 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0504 1 3235483 3241538 Lal9g0363 9 2416684 2422667 LSH