Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0502 ATGGATTCAGATCCAGTTGGGACCTTCTTTCTCCACAAGCCACCAATTGTTCTAAACTCTTTCCCTTGTGAAGAAGACAACACAAAGTGGACACTGAGTCCTAATAGCAATAACATGGAGGCCACACTTAGGACCTCTTCACCTACACATAACACCACCACAATCCCTTTCCAAGTCAACAACCATGCCTCTTCATCTCATGATATGATCATAACAACAGAAATGGACTTCTTCTCTGACAACAACAACAACAACAACGTTGCCTCTTCTTCTGTCCCTGACAATGATCATATACATCATCATGCTACACCTACTAGGTTGGAATTCAAAGTAAACACTGGTCTGAATCTTCTTACTACCAACACTAGCAGTGATCAATCTATGGTGGAGGATGAGATATCACCTAATTCAGAAGACAAAAGAAGTAAGAATGAGAAGGCAGTTCTTGAAGCTGAGCTAGAGCGAATGAAGGTTGAGAATCAACGGTTGAAGGAGACTTTTGATGAGGTTAACACCAATTACAAAGCTTTGCAGATGCATGTGGTGAATTTGATGAGGGACCAGAAGGGAGAGGATGGAGAAGAAAGAGAAGTTTTTGATGGGAAAGTAGAAGAGAATAAGAAAAGGAAGCAAATTGAGAACAATGGGGTATTAGTGCCAAGGCAGTTTATGGATCTGGGTTTGGCTACAAACATTTCTGAGACTAAGATTGAAGATCCCTCTTCTTCATCAAGGGGAAGAAGTCAAGATAGATCAGGATCACCAGGAAATAATAATTTAGAGGTAGCTTCGAAGGAGTTAGGTAGTACTAGTAAGAATGTGAATGGGAGTGGTAGTGATGAAGGACTTGTGTTTGATCAAGAAAAGAAGGATTTTGGTAATGGTAGTAGGGGAATTGAAAGTCCTCCCAAAAATGTTGATCATGCCGAGGCTACTATGAGGAAGGCAAGAGTTTCTGTTAGAGCTAGATCAGAAGCACCAATGATCACTGATGGGTGTCAATGGCGAAAGTATGGGCAGAAGATGGCTAAAGGAAACCCATGTCCTCGAGCTTATTATCGGTGCACCATGGCTTCTGGTTGCCCAGTTAGAAAACAGGTGCAAAGGTGTGCTGAAGACCGAGCAGTTCTTATCACAACATATGAAGGCAATCACAACCACCCTTTACCTCCAGCAGCAATGGCAATGGCACAAACCACTTCCTCAGCTGCAAGAATGTTGCTTTCAGGATCAATGTCAAGTGCTGACAGCTTAATGAATGCAAACTTCCTCAGTAGGACACTGCTTCCTTGCTCTTCAAGCATGGCATCTATCTCAGCATCTGCTCCATTTCCAACTGTTACATTGGACTTAACTCAAACTCCAAACCCTCTTCAATTCCCAAGGCCTCCAATCCAGTTCCAAATACCCTTCCCTCAGAGTTTTGCCAACTCCTCAGCCTCATTAATGCCTCAGATATTTAATCAGGCACTCTATAACCAATCTAAGTTTTCTGGTCTTCAAATGTCTCAAAATGGAGTAGTAGACCCTTCTCAATTAGGTGGTAATCAAGCTACTCCACCACACCTTGCTGATTCAGTTAGTGCTGCCACTGCAGCCATTGCAACTGATCCTAACTTCACTGCTGCTTTGGCAGCTGCTATCACTTCCATTATTGGTGGTGGTGGTGGTGGTGGTGGTGTTGCTCAGGCAAACAACAACAGCACAAGCAATAATGGCAGCAACAGCAATGACAATATCACAACTAGCAACCAGAATAGCAACAATGGAAAGCAATAA 1779 0.4289 MDSDPVGTFFLHKPPIVLNSFPCEEDNTKWTLSPNSNNMEATLRTSSPTHNTTTIPFQVNNHASSSHDMIITTEMDFFSDNNNNNNVASSSVPDNDHIHHHATPTRLEFKVNTGLNLLTTNTSSDQSMVEDEISPNSEDKRSKNEKAVLEAELERMKVENQRLKETFDEVNTNYKALQMHVVNLMRDQKGEDGEEREVFDGKVEENKKRKQIENNGVLVPRQFMDLGLATNISETKIEDPSSSSRGRSQDRSGSPGNNNLEVASKELGSTSKNVNGSGSDEGLVFDQEKKDFGNGSRGIESPPKNVDHAEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMASGCPVRKQVQRCAEDRAVLITTYEGNHNHPLPPAAMAMAQTTSSAARMLLSGSMSSADSLMNANFLSRTLLPCSSSMASISASAPFPTVTLDLTQTPNPLQFPRPPIQFQIPFPQSFANSSASLMPQIFNQALYNQSKFSGLQMSQNGVVDPSQLGGNQATPPHLADSVSAATAAIATDPNFTAALAAAITSIIGGGGGGGGVAQANNNSTSNNGSNSNDNITTSNQNSNNGKQ 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0502 592 MobiDBLite consensus disorder prediction 246 280 - -
Lal1g0502 592 ProSiteProfiles WRKY domain profile. 324 390 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal1g0502 592 SUPERFAMILY WRKY DNA-binding domain 322 390 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal1g0502 592 PANTHER OS05G0567200 PROTEIN 51 582 - -
Lal1g0502 592 Gene3D WRKY domain 314 391 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal1g0502 592 MobiDBLite consensus disorder prediction 561 592 - -
Lal1g0502 592 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 51 582 IPR044810 GO:0003700
Lal1g0502 592 Pfam WRKY DNA -binding domain 331 388 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal1g0502 592 MobiDBLite consensus disorder prediction 232 305 - -
Lal1g0502 592 MobiDBLite consensus disorder prediction 121 144 - -
Lal1g0502 592 SMART WRKY_cls 329 389 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal1g0502 592 Coils Coil 139 180 - -
Lal1g0502 592 MobiDBLite consensus disorder prediction 557 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0502 Lal-Chr1 3222229 3227534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0502 68 554 WRKY Transcription Factor Family AT1G62300 49.312 1.88e-126 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal1g0502 WRKY 3.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0502 - - gmx:100127384 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0502 1 3222229 3227534 Lal6g0068 6 405122 408042 ECH
Lal1g0502 1 3222229 3227534 Lal1g0502 1 3222229 3227534 ECH
Lal1g0502 1 3222229 3227534 Lal5g1472 5 17177574 17180501 ECH
Lal1g0502 1 3222229 3227534 Lal11g0428 11 3203910 3207024 ECH
Lal1g0502 1 3222229 3227534 Lal2g0402 2 2418316 2421446 LSH
Lal8g0034 8 300547 303484 Lal1g0502 1 3222229 3227534 PCT
Lal1g0502 1 3222229 3227534 Lal8g0034 8 300547 303484 PCT