Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0484 ATGGAACATACAAGGACAATGAATTATGCGGTTGTTTATGTCATTTTACTTTGCACGTTGGCTCAAGGGGGCTCAGAGGGGAAAATGGGAGAGAACGATGATTTTTTCAAACATGTTGCTTCTGATTTTTCATCATCATCTATTCATTTACATGAAAATCAGGTAGAGGTAGTATGGAAACATTGCAGGAAAGAGTTGTTAGAGAGGAACAATGATATTGTCAAAGATTTTTACAGGCATCAACTAGAAGGAAGCAGTGACATGAGGTCTATTCTTCTTATAGAAAACAACATAGAGAAAGAAACTAAGTCTCTGCCTCTCAATATGAAAAGAAACTTGTTGGATTGTATCAGATTACCAAGTAGTCCTAGTAGTCCTAGTAGTCCTACTCCTCATGTTTCTGAAGTGAAAATTGGCTCTAGATGTTTGTTAACAAGGCATTCTGGATCATCATTTGGTCATGGAAGAAATTTGATTTCTATATCACAAAATGATCAATTGCCACCAAGCCCTTCTAATGTTCCATCCCGCGGACCTGCATTGGACTTAAAAAATGGTGGTTCAACACCAAGTCATGGCCCATCACCAGGCAGTTCTACTACACCATCACCAACACCAACACCGGATCGGTCTGGCAATGATTTTTCATTTCCTCCAAATATGTTTGCGCCATTTCTACCAGCACCACGTCAACCTGTATTATATGCTCCTGATTCTCCACCTCCTAACAATGATGACAAAAATAAGAAAATAATTATTGTTGCTGCTGGTATAGCAGGAGTTATAATCTTTATAGGCTTGATCCTCTGCTATCGCGTGATCAAAGTTTACAAAGATAATAGATCTTTACTCAAATTAACCTCAAAGGACTATTCTGGTGGTTCACAGAAGGTTATTCGTTTGGGAAATAGTGATAAGGGAAGCTATAGTATTAAGAATGAGAAGGACCCTTCTAATGTTAAAAGTGTGTCCATTAAGGCTAAAGATAACAATAACTCATTGGTTGAGACATCATCATCAGAAGTTATGGGACAAGCACCAGTACCTTCTACTGGAAAACCAGCCCCTCCGTCCCCTAGCCCACCACCACCACCGCCTCCAGAGCCACCTGCTCTTGCTCCTCACCCGCCACCGCCACCAAGAGCAGGTCATCCTCCACAGGCTCCTCCCAAACCAATTAAAGGTAAAAACCGACTGGCACCGCTTTGTCCTAAAGATGGAAGTTCTAGTGAGGGTGGTGAATCTGACGCTCCAAAACCAAAACTCAAGCCATTTTTTTGGGATAAGGTTGCTGCAAAACCTGATCAGTCAATGGTGTGGCATGAGATCAATGCAGGGTTCAATGAGCAAAAGATGGAATCATTATTTGGCTGCACCAACCATAACAGAAATGAAAGGAAAAAAGATTCACCAACTGTTGATACTTCAGTACAATATATTCAGATTATTGATCCTAAGAAAGCACAGAACTTGTCAATTCTTTTACGAGCTCATAATGTGACAACACCAGAAGTTATTGATGCTCTTAAAGAAGGTACTGAGATTCCTGTTGAGCTCATCCAGACATTGTTGAAGATGGCACCAACATCAGAAGAGGAACTGAAGCTCAGGTTATTCACAGGAGAACTTTCTCAACTTGGCCCAGCAGAGAGGTTTCTCAAACTCTTGGTTGACATTCCATTCGCTTTCAAACGCCTTGAAGCTCTTATGTTCATGTTTATCCTTCCAGAAGAATCCTCAAGCATTAAGGAGTTGCTTGCAACATTAGAGGTTGCTTGCAGCAAACTCAGGAAAAGCAGGTTATTCATGAAACTACTAGAAGCAGTTCTTAAAACTGGAAACCGCATGAATGACGGAACCTATCGCGGTGGTGCTCAAGCATTTAGGCTTGACACACTTCTGAAACTCTCGGATGTAAAAGGAACAGATGGAAAGACAACACTGTTACACTTTGTGGTACAAGAGATTATACGTTCTGAGGGGATAAGAGCTGTAAGGACAGAAAGAGCAAGAAGAAGTGAGTCAAGTGTAGCAGCAGAAGATTGTTTTGATGAAGGAAGTGAAGAATCCTCAGAACACTATCGACGTCTTGGCCTCCAAGTAGTTTCAGGTCTAATCAATGAACTTGATGATGTGAAGAAAGCTGCAGTTATAGATGGAGATGCACTCACTGCTGCAGTGTCAAAACTTAGCTACACATTGACGAAGACTCAAGAGTTTCTGAACACTGAGTTGAAGGATATTGAAGAAGAGGACGAGTTCAAACAATGCATAGAAAGGTTTGTGGAGAAAGAAAGAGATGATGTGACATGGCTTGTGGAAGAAGAAAAGAAGATAATGGCTCTTGTTAAGAGCACAGCAGATTACTTCCATGGGAATGCAGGAAAAGATGAAGGGCTGCGTTTGTTTTTGATTGTGCGCGACTTCTTGATAATATTGGACAAGGTGTGCAAAGAGGTGGAGGACACAACTACTAAGGCAGCTAAGGCTTCTTACAAGAAATTGGAAGCTCCATCAACATCATCTTCACCTAACACGATTCGCCAAAACTCATCACCTACTGATCTACATAGAAGATTATTCCCGGCAATTGCGGAGAGGAGAGTGGACTACTCTAGCTCTGATGATGATGACGAGGGCTTTGCAACATAG 2652 0.414 MEHTRTMNYAVVYVILLCTLAQGGSEGKMGENDDFFKHVASDFSSSSIHLHENQVEVVWKHCRKELLERNNDIVKDFYRHQLEGSSDMRSILLIENNIEKETKSLPLNMKRNLLDCIRLPSSPSSPSSPTPHVSEVKIGSRCLLTRHSGSSFGHGRNLISISQNDQLPPSPSNVPSRGPALDLKNGGSTPSHGPSPGSSTTPSPTPTPDRSGNDFSFPPNMFAPFLPAPRQPVLYAPDSPPPNNDDKNKKIIIVAAGIAGVIIFIGLILCYRVIKVYKDNRSLLKLTSKDYSGGSQKVIRLGNSDKGSYSIKNEKDPSNVKSVSIKAKDNNNSLVETSSSEVMGQAPVPSTGKPAPPSPSPPPPPPPEPPALAPHPPPPPRAGHPPQAPPKPIKGKNRLAPLCPKDGSSSEGGESDAPKPKLKPFFWDKVAAKPDQSMVWHEINAGFNEQKMESLFGCTNHNRNERKKDSPTVDTSVQYIQIIDPKKAQNLSILLRAHNVTTPEVIDALKEGTEIPVELIQTLLKMAPTSEEELKLRLFTGELSQLGPAERFLKLLVDIPFAFKRLEALMFMFILPEESSSIKELLATLEVACSKLRKSRLFMKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIRAVRTERARRSESSVAAEDCFDEGSEESSEHYRRLGLQVVSGLINELDDVKKAAVIDGDALTAAVSKLSYTLTKTQEFLNTELKDIEEEDEFKQCIERFVEKERDDVTWLVEEEKKIMALVKSTADYFHGNAGKDEGLRLFLIVRDFLIILDKVCKEVEDTTTKAAKASYKKLEAPSTSSSPNTIRQNSSPTDLHRRLFPAIAERRVDYSSSDDDDEGFAT 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0484 883 MobiDBLite consensus disorder prediction 154 171 - -
Lal1g0484 883 Gene3D Formin, FH2 domain 417 849 IPR042201 -
Lal1g0484 883 PANTHER FORMIN-RELATED 7 879 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lal1g0484 883 Pfam Formin Homology 2 Domain 414 813 IPR015425 -
Lal1g0484 883 MobiDBLite consensus disorder prediction 154 221 - -
Lal1g0484 883 PANTHER FORMIN-LIKE PROTEIN 7 879 - -
Lal1g0484 883 MobiDBLite consensus disorder prediction 834 857 - -
Lal1g0484 883 MobiDBLite consensus disorder prediction 294 421 - -
Lal1g0484 883 MobiDBLite consensus disorder prediction 835 856 - -
Lal1g0484 883 SMART it6_source 412 828 IPR015425 -
Lal1g0484 883 MobiDBLite consensus disorder prediction 294 346 - -
Lal1g0484 883 ProSiteProfiles Formin homology-2 (FH2) domain profile. 412 839 IPR015425 -
Lal1g0484 883 MobiDBLite consensus disorder prediction 350 392 - -
Lal1g0484 883 SUPERFAMILY Formin homology 2 domain (FH2 domain) 362 828 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0484 Lal-Chr1 3044560 3049130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0484 413 844 FH2 protein (formin) Gene Family AT5G67470 44.395 9.76e-111 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0484 - - lja:Lj3g3v2888350.1 729.939