Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0478 ATGGCGAAGGTGCAAGAGAGAGAAAGTGGGGTATCATTGTTTAGTGAGGAAGAGGTGAGTAAGGTGAGTGGGTTGAAGTTTGTTGATGAGTATGTTGAAGTAACGTGTGGGTGTACCAGCCATAGATATGGTGATTCTGTTGGAAGGCTTAGGGTTTTCTCTAATGGGTATCTCCAAATTTCTTGTGAATGCACCCCTGGTTGCACAGAAGACAAGTTGTCTCCTTCTGCATTTGAGAAACACTCTGGAAGAGAGACTGCCAGGAAATGGAAGAACAATATATGGGTAATAGTTAATGGTGAGAAGGTTCCATTGTATAAAACAGTGTTGCTCAAATACTACAATCAAGTGTCAAAAGCTGCTAATGGATCCAATAGATCCCAACATGGCCGCGCTTGTCACCGCGACGAGTTTCTTCGCTGTTCTAGGTGCGACAAAGAGCGCAGGTTCCGTCTGAGGACTAAAGAGGAATGCCGAATTCACCATGATGCTATAGCAGAATTACATGTGACGATGAAGAAGAACGAGCAAGCCGCAGAGTTTACAGGGCATGCACTCGTTCTCCAACATGCAAAGGTTGCACTTCATGTGTGTGCTTTGGATGTGATATTTGCCGCTTTTCAGATTGCAGCTGCCAGATTTGTACTGACTTCACAAGCAATGCCAAAGCTTGAGTCCTTCAACTAA 687 0.4454 MAKVQERESGVSLFSEEEVSKVSGLKFVDEYVEVTCGCTSHRYGDSVGRLRVFSNGYLQISCECTPGCTEDKLSPSAFEKHSGRETARKWKNNIWVIVNGEKVPLYKTVLLKYYNQVSKAANGSNRSQHGRACHRDEFLRCSRCDKERRFRLRTKEECRIHHDAIAELHVTMKKNEQAAEFTGHALVLQHAKVALHVCALDVIFAAFQIAAARFVLTSQAMPKLESFN 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0478 228 ProSiteProfiles SAND domain profile. 16 105 IPR000770 GO:0003677
Lal1g0478 228 PANTHER PROTEIN ULTRAPETALA 1 1 172 IPR020533 -
Lal1g0478 228 PANTHER PROTEIN ULTRAPETALA 1 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0478 Lal-Chr1 3006800 3011960 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Lal1g0478 SAND 0.00016 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0478 - - gmx:100796203 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0478 1 3006800 3011960 Lal1g0478 1 3006800 3011960 ECH
Lal1g0478 1 3006800 3011960 Lal2g0450 2 2730198 2734556 LSH