Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0476 ATGGGTTGGAAGAGATCTGATTTAGAATACAATAAGAGAGTGAAGATCTATGGACGAGTTCTCTTTGGTTTTTTGCTGATCTGCATAATTCAGCTTTCACGTGCAGCTACTGATGCAATTGATGTTGCTGCGATTAATAGCTTACATGCTGCACTGGGATCCCCTACTCTCCCTGGGTGGGTTTCTAGTGCTGGAGATCCATGCGGAGAAGCGTGGCAAGGTGTTCAATGTAATGGTTCATCAATACAGAGAATAGTTCTCAATGGTGCAAATTTGGGAGGAGAACTGGGTGATAGCCTAGGGTCATTCGTTTCTATCTCAGTAATTGATCTAAGCAACAATCACATCGGGGGAAGTATTCCATCCAGTTTGCCGGTTACCTTGAAAAACTTTTTCCTTTCATCTAATCAGTTAACTGGAATTATTCCAACCACTTTATCCACATTGACTGGACTGACAGACATGTCTCTTAATGAGAATCTTTTAACTGGAGAAATACCAGATGCATTTCAGTCACTTCCCGTACTGATCAATCTAGATTTATCGAATAATAACTTGAGCGGGGAATTGCCTCCATCGATGGAGAATTTGTCATCCTTAACCACCCTGCACTTACAGAATAATCATCTGTCTGGGACCCTTGATGTTTTGCAAGACCTTCCTCTGAAAGATTTGAATGTCGAGAACAATCAGTTTTCTGGCCCAATACCTCCAAAGCTGTTAAGCATCCCTGACTTCAGACCAGATGGAAACTCATTTAATAATGTTACCGGTATTGGAGCTCCAGCACCTCCACCTGGTTCCCCAGTGACAGCACCACCAGGAACACCAGTTTCTGGGGCACCGCCAGGAACAAATGTTTCTGGGGCACCACCAGGAACACCAGTTGCTGGAGCAACACCTTCTGGACGTGTACCTACTAGACAAGCTGATGGACCAACTGCAGCAAAAGCATCAAATTCTGGGAAATCCAAAACAACCACCAAAAGGGTGGTTTTGATATCTATAGGTAGCGTATTGGGATTCGTTGTTTTGGTATTGGCAATCCTTCTCTTTATTCCAATATGTGGCAAAAGGGAACGGGTTGATGGAAGGTCCAGACGACATCAAATTGGTGCATATGGAGTTGAAAGACAGAATCCAAGGGATTATGGGGCCTTAGTCCAACTGCCTACACCACCGGTAGGGGATGTTACAAGGCCTAAAAAGGACCATCAAGAAGAGACCAGGAGAGTTGAGGCTATTCCAAAGCCAAAGGTTGAGCCAGAGAAGGATGTGCAAAGAAAGGCAGCAATACCAACACGGAGAGATCATGAGATCGATTTGAGTCCACTAGAAGTATACTCAATGCCTCCCCCTCCCCCTCCCCCTCCACCACCCCCACCTCCCCCTCCTCCTCCTCCTACGCCTCCACCTCCACCTCCTCTGTCATCTCCTACTGAGAGGGTGATTGTTGAACCGACGACATTCCGCAGAGGGACTAATGTTAGTCCAGCACGAAAAAGTTCAGTTCCTCTTCCCACTTTTGCAAAATATTTCACCATTGCATCTCTTCAACAGTATACAAATAGTTTTTCTCAAGATAACCTTATAGGAGGAGGTATGCTGGGCAGCGTGTATAGGGCAGAGCTTCCGGATGGAAAGAGATGCAATTGTAGTATATGCTTCCATGGCTCCCTCTTCTTTGTGCCTAACTCAATTACTCTGGTCTCTGCTAGTTATTTGATTCTTGAATTGCTTACAAAAATAGTTGAACATTGTTTATTGAAAGATTCTGGTTTGCTTCCTCCTACACCTTTACCTCTTGTGCTTTTCCTATTTGACATGCTACTTGCTGTAAAGAAACTGGACAAGAGAACTACTGATCACCAGAAAGATGATGACTTTCTTGAATTGGTAAATAATATAGACAGAATACGTCATGTAAATATTGTTAAGCTTATTGGATACTGCTCGGAGCATGGTCAAAGACTTCTGATCTATGAGTACTGCGAAAACGGGTCACTGCATGATGCAATCCATTCAGATGATGCATTTAAAACAAAACTTTCATGGAATACTCGCATCCGGATTGCACTCGGCGCAGCTAGAGCCTTAGAGTATTTGCATGAGCAATGTCAGCCACCTGTGGTACACAGAAATTTGAAGTCTGCCAATATTCTCCTTGATGACGATCTATCTGTGCGTGTATCTGATTGTGGTTTGGCTCCATTAATAGCTTCAGGGTCTGTGAGTCAGCTCTCGGGGCAACTGCTAACCGCTTATGGCTATGGAGCTCCCGAATTTGAGTCAGGTATTTACACATACCAGAGTGATGTTTACAGCTTTGGAGTGGTCATGCTAGAACTTTTGACTGGCCGCCAGTCACATGACAGGACACGTCCCCGAGGGGAACAATTTCTTGTCAGATGGGCAATTCCCCAGCTTCATGATATTGAGGCCTTATCAAGCATGGTCGATCCTTCTTTAAATGGACGTTACCCTGCCAAATCATTGTCAAACTTTGCCGACATTATTTCTCGATGCCTTCAGCCCGAGCCGGAATTTCGGCCAGCAATGTCAGAGATTCAGATTCCATCATTTTCGTTCACTCTTCTCATGACTCGCTACGACTCCAACCCCTTCGAAGAAGAACAAGAGGTTAATCCCTTTTCGATTTTGTCGAATTGGATTTTTTTGGTTATGTTTCTTCCATTTCCGTTACTGTTTGTGGAGGAAACAGCTAAAGGAAAAAGGTCTGGACAATCAAGTTATGGTGGAGGTTCATTTTATACTACTAACCCTGGAAGTGTTCCCTCTACAACCTCAAGTCTTTCACCCCTTCCTCACGAGCCTTATGATCGTGGGACAACCATTGACATTCCTCTTGATAGCGCAAAGGACGTCAAAGCAAAGGAGAAGGAACTTCAGGCTAAAGAGGCTGAATTGAAAAGAAGGGAACAGGAAATAAAACGAAGGGAAGATGCTATAGGACGAGCTGGAATAGTTATAGAGGAGAAAAATTGGCCACCTTTTTTCCCCATTATTCATCATAACATTGCAGATGAAATACCAATTCACCTTCAAAGGGTCCAGTATGTTGCATTTACAACATGGTTAGGTCTGGTTCTGTGTCTTCTGTGGAATATTGTGGCAGTTACTACTGCGTGGATCAAAGGAGAAGGTCCAACAATCTGGTTCCTTGCTATTATCTACTTCATTTCTGGTGCTCCTGGATCCTACGTGTTGTGGTATCGCCCGCTTTATCGTGCCATGAGTGATATTGACCTGCTAAGCTTTATCACAATTATGAAGCGCCAACTCTTTGACTGCAAGAGCTGTATGTATATCTGGGTAATGTGTGGGAAGAAAGTGTCAGCCTGGAAGGTGCATATTGGCTTTTGCATTTTTGCCGCTGTTGCTCCACCAATCATCTTCAAAGGAAAATCTCTCGCTGGTATATTGCCTGCTATCAGCGTGTTGGGTGACAATGCATTGGTCGGGATATTCTACTTTATTGGGTTTGGATTTTTTTGTCTGGAGTCACTTATAAGCATCTGGGTTATTCAGCAAGTATATATGTACTTCCGCGGCAGTGGCAAGGCGGAAGAGATGAAGCGTCAGGCTGCAAGAGGGACCGTGATGGCAGCCGTATGA 3636 0.4422 MGWKRSDLEYNKRVKIYGRVLFGFLLICIIQLSRAATDAIDVAAINSLHAALGSPTLPGWVSSAGDPCGEAWQGVQCNGSSIQRIVLNGANLGGELGDSLGSFVSISVIDLSNNHIGGSIPSSLPVTLKNFFLSSNQLTGIIPTTLSTLTGLTDMSLNENLLTGEIPDAFQSLPVLINLDLSNNNLSGELPPSMENLSSLTTLHLQNNHLSGTLDVLQDLPLKDLNVENNQFSGPIPPKLLSIPDFRPDGNSFNNVTGIGAPAPPPGSPVTAPPGTPVSGAPPGTNVSGAPPGTPVAGATPSGRVPTRQADGPTAAKASNSGKSKTTTKRVVLISIGSVLGFVVLVLAILLFIPICGKRERVDGRSRRHQIGAYGVERQNPRDYGALVQLPTPPVGDVTRPKKDHQEETRRVEAIPKPKVEPEKDVQRKAAIPTRRDHEIDLSPLEVYSMPPPPPPPPPPPPPPPPPPTPPPPPPLSSPTERVIVEPTTFRRGTNVSPARKSSVPLPTFAKYFTIASLQQYTNSFSQDNLIGGGMLGSVYRAELPDGKRCNCSICFHGSLFFVPNSITLVSASYLILELLTKIVEHCLLKDSGLLPPTPLPLVLFLFDMLLAVKKLDKRTTDHQKDDDFLELVNNIDRIRHVNIVKLIGYCSEHGQRLLIYEYCENGSLHDAIHSDDAFKTKLSWNTRIRIALGAARALEYLHEQCQPPVVHRNLKSANILLDDDLSVRVSDCGLAPLIASGSVSQLSGQLLTAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSHDRTRPRGEQFLVRWAIPQLHDIEALSSMVDPSLNGRYPAKSLSNFADIISRCLQPEPEFRPAMSEIQIPSFSFTLLMTRYDSNPFEEEQEVNPFSILSNWIFLVMFLPFPLLFVEETAKGKRSGQSSYGGGSFYTTNPGSVPSTTSSLSPLPHEPYDRGTTIDIPLDSAKDVKAKEKELQAKEAELKRREQEIKRREDAIGRAGIVIEEKNWPPFFPIIHHNIADEIPIHLQRVQYVAFTTWLGLVLCLLWNIVAVTTAWIKGEGPTIWFLAIIYFISGAPGSYVLWYRPLYRAMSDIDLLSFITIMKRQLFDCKSCMYIWVMCGKKVSAWKVHIGFCIFAAVAPPIIFKGKSLAGILPAISVLGDNALVGIFYFIGFGFFCLESLISIWVIQQVYMYFRGSGKAEEMKRQAARGTVMAAV 1211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0476 1211 MobiDBLite consensus disorder prediction 251 327 - -
Lal1g0476 1211 ProSiteProfiles Protein kinase domain profile. 525 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0476 1211 Gene3D Phosphorylase Kinase; domain 1 607 664 - -
Lal1g0476 1211 Pfam Protein tyrosine and serine/threonine kinase 610 857 IPR001245 GO:0004672|GO:0006468
Lal1g0476 1211 MobiDBLite consensus disorder prediction 262 280 - -
Lal1g0476 1211 ProSiteProfiles Leucine-rich repeat profile. 199 221 IPR001611 GO:0005515
Lal1g0476 1211 Gene3D Phosphorylase Kinase; domain 1 492 553 - -
Lal1g0476 1211 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 609 856 - -
Lal1g0476 1211 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 30 548 - -
Lal1g0476 1211 PANTHER OS01G0253100 PROTEIN 609 856 IPR045271 GO:0004714|GO:0006468
Lal1g0476 1211 PANTHER OS01G0253100 PROTEIN 30 548 IPR045271 GO:0004714|GO:0006468
Lal1g0476 1211 Gene3D Ribonuclease Inhibitor 41 262 IPR032675 -
Lal1g0476 1211 Coils Coil 959 989 - -
Lal1g0476 1211 SUPERFAMILY L domain-like 41 242 - -
Lal1g0476 1211 MobiDBLite consensus disorder prediction 912 941 - -
Lal1g0476 1211 Pfam Leucine rich repeat N-terminal domain 41 78 IPR013210 -
Lal1g0476 1211 MobiDBLite consensus disorder prediction 387 481 - -
Lal1g0476 1211 MobiDBLite consensus disorder prediction 912 944 - -
Lal1g0476 1211 MobiDBLite consensus disorder prediction 313 327 - -
Lal1g0476 1211 Pfam SCAMP family 999 1191 IPR007273 GO:0015031|GO:0016021
Lal1g0476 1211 MobiDBLite consensus disorder prediction 398 443 - -
Lal1g0476 1211 Gene3D Transferase(Phosphotransferase) domain 1 665 859 - -
Lal1g0476 1211 MobiDBLite consensus disorder prediction 447 480 - -
Lal1g0476 1211 Pfam Leucine rich repeat 127 186 IPR001611 GO:0005515
Lal1g0476 1211 SUPERFAMILY Protein kinase-like (PK-like) 504 857 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0476 Lal-Chr1 2991112 3004004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0476 27 856 Strubbelig Receptor Gene Family AT4G03390 52.133 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lal1g0476 PK_Tyr_Ser-Thr 5.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0476 - - egt:105970595 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0476 1 2991112 3004004 Lal1g0476 1 2991112 3004004 ECH
Lal10g0705 10 14835983 14841748 Lal1g0476 1 2991112 3004004 PCT
Lal8g0805 8 5792532 5797437 Lal1g0476 1 2991112 3004004 PCT
Lal1g0476 1 2991112 3004004 Lal10g0705 10 14835983 14841748 PCT
Lal1g0476 1 2991112 3004004 Lal8g0805 8 5792532 5797437 PCT