Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0475 ATGGGGAGTTGTGTCTCAACAAGCAATAGGAGTACTTGTAGCAGCAGGAGCAATGGAGAAAAGGTCTCTCCATTTTGCTTAGAAGTTGGATGCTGTGGGCAAAAGAGAGCAGCAAGGAGAACATTCTCTGATCATGTTATTTCTCTAGACCATTTACCATCGATACCCAGCCGAATCTTCACTAATGGAAAGAGTCAGTCTTCTTGCATATTCACGCAGCAGGGCCGCAAGGGTATTAATCAGGATGCCATGGTTGTATGGGAAGATTTCATGTCTGAAGATACGATCTATTGTGGTGTCTTTGATGGCCATGGTCCACATGGTCATCTCGTCGCACGCAAAGTGAGGGATGCTTTGCCATTAAAACTGCTTTCATTTGTGAATTCGTCCGAATCAAAGCAAAATGGAAATAGATCGGGTAAAGCTTGGTTTGAACGGAATATAAAACCTGATACTGAAGATTCTGAGAAGGATTGCTCTACCGAGGATAAACTGAATTCTACATGGAGAGAAGCTTTCATTAAGGCATACAAGGCTATGGATAAAGAACTCAAGTCTCATCCTAATTTGGACTGCTTCTGTAGTGGGAGCACAGCTGTAACTTTAGTGAAGCAGGGTTCAAATCTGTTCATGGGCAATATCGGAGATTCTCGAGCAATCATGGGATCCAGGGACAGCAATGACTCCATGGTGGCAATTCAGTTGACTGTTGATTTGAAGCCTGATTTGCCAAGAGAAGCAGAAAGAATTAAACGCTGCAAGGGTCGGGTATTTGCTTTGCAAGATGAGCCAGAAGTTCATAGGGTATGGTTGCCTTTTGATGATGCACCGGGTTTAGCAATGGCTAGAGCATTTGGAGATTTCTGCTTGAAGGAGTATGGTGTGATTTCTATACCTGAATTTTCTCACCGGCTGCTTACTAACAAAGATCAATTCATTGTTCTTGCCTCTGATGGGGTTTGGGATGTTTTAAGCAATGAAGAGGTGGTGGAGATAGTATCTTCAGCACAATCACGGTCATCGGCAGCGAGGGTTGTGGTAAATTCTGCTGCTCGGGAGTGGAACCTCAAATATCCTACTTCAAAGATGGATGACTGCGCTGTTGTGTGCCTATTTTTGGATGGGAAAATGGACTCGGAATCTGATTATGATGAACAAGGCTTTTCTTCTGCAACAATCCAGAGCAACCATTCAGACGATGGACAAAAATCCGAGCCATCTTTGCAAAGGAACTTCACCGTGAGATCTGCAGACGAAAACGAGACTAATGTAGCATCTGTTGAGGTTGAAGTTGCAACGCCATTGGCCGAAGATCAAAACTGGTTAGGTTTGGAAGGGGTCACCCGCGTAAATTCACTAGTCCAACTTCCTCGATTTCCTGAGAAAAGGCCGAAAACTCTTTAA 1404 0.4395 MGSCVSTSNRSTCSSRSNGEKVSPFCLEVGCCGQKRAARRTFSDHVISLDHLPSIPSRIFTNGKSQSSCIFTQQGRKGINQDAMVVWEDFMSEDTIYCGVFDGHGPHGHLVARKVRDALPLKLLSFVNSSESKQNGNRSGKAWFERNIKPDTEDSEKDCSTEDKLNSTWREAFIKAYKAMDKELKSHPNLDCFCSGSTAVTLVKQGSNLFMGNIGDSRAIMGSRDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVHRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTNKDQFIVLASDGVWDVLSNEEVVEIVSSAQSRSSAARVVVNSAAREWNLKYPTSKMDDCAVVCLFLDGKMDSESDYDEQGFSSATIQSNHSDDGQKSEPSLQRNFTVRSADENETNVASVEVEVATPLAEDQNWLGLEGVTRVNSLVQLPRFPEKRPKTL 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0475 467 SUPERFAMILY PP2C-like 57 375 IPR036457 -
Lal1g0475 467 MobiDBLite consensus disorder prediction 383 407 - -
Lal1g0475 467 CDD PP2Cc 66 373 IPR001932 -
Lal1g0475 467 MobiDBLite consensus disorder prediction 1 20 - -
Lal1g0475 467 MobiDBLite consensus disorder prediction 384 407 - -
Lal1g0475 467 Gene3D - 59 381 IPR036457 -
Lal1g0475 467 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 454 - -
Lal1g0475 467 Pfam Protein phosphatase 2C 156 350 IPR001932 -
Lal1g0475 467 PANTHER ALPHABET, ISOFORM E-RELATED 1 454 - -
Lal1g0475 467 SMART PP2C_4 56 371 IPR001932 -
Lal1g0475 467 ProSiteProfiles PPM-type phosphatase domain profile. 67 373 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0475 Lal-Chr1 2981481 2985403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0475 1 466 PP2C-type Phosphatase Gene Family AT1G03590 69.474 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0475 - - lang:109351819 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0475 1 2981481 2985403 Lal1g0475 1 2981481 2985403 ECH
Lal1g0475 1 2981481 2985403 Lal2g0451 2 2735084 2747659 LSH
Lal10g0703 10 14816190 14820101 Lal1g0475 1 2981481 2985403 PCT
Lal8g0799 8 5764289 5768829 Lal1g0475 1 2981481 2985403 PCT
Lal1g0475 1 2981481 2985403 Lal10g0703 10 14816190 14820101 PCT
Lal1g0475 1 2981481 2985403 Lal8g0799 8 5764289 5768829 PCT