Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0461 ATGGCCTCCATGCCTTTGGGGCCGCACCACCACCAACCACCGTTAGCGTCGGCGCCTTCTCAACCTCCACAACATCCTCAACCAGAAGTGCCTCGTCGGAGCTCCGACATGGAGACCGATAAGGATATGTCATCTACTGTCATCGTACAGAATGATGCAGTCACTGGTCACATAATATCTACCACAATTGGAGGAAAAAATGGTGAACCTAAGCAGACCATCAGTTACATGGCAGAACGTGTTGTTGGCACTGGATCATTTGGAGTTGTTTTCCAGGCGAAGTGCTTGGAGACGGGTGAGGCAGTGGCTATAAAGAAGGTCTTGCAGGACAGGCGTTACAAAAACCGTGAGCTTCAGTTAATGCGCTTGATGGATCACCCAAATGTAATTTCTCTGAAGCACTGTTTCTTCTCTACGACAAGTAGAGATGAACTTTTTCTGAATTTGGTAATGGAATACGTCCCTGAGACGATGTACCGGGTTCTAAAGCACTACAATAATATGAACCAGAGAATGCCCCTCATTTATGTAAAACTATATACATATCAAATCTTTAGGGGACTAGCATATATCCATACGGTATCAGGAGTTTGTCATAGGGATGTCAAGCCTCAAAATCTTTTGGTTCATCCTCTTACTCACCAAGTTAAGCTTTGTGATTTCGGGAGTGCAAAAGTTCTGGTCAAGGGCGAAACAAACATTTCGTACATTTGTTCACGTTACTACAGGGCTCCAGAACTAATATTTGGTGCAACAGAGTACACAACTTCTGTTGATATCTGGTCAGCTGGCTGTGTCCTTGCTGAACTTCTTCTAGGCCAGCCATTATTTCCAGGAGAAAATCAGGTGGACCAACTCGTGGAAATCATTAAGGTTCTTGGTACTCCAACTCGAGAAGAAATACGTTGCATGAACCCAAATTATACAGATTTTAGATTCCCTCAGGTTAAAGCTCATCCTTGGCACAAGGTTTTTCACAAGCGAATGCCCCCTGAAGCAATTGACCTTGCATCAAGGCTTCTCCAATATTCACCAAGTCTTCGCTGCACTGCGCTGGAAGCATGTACACATCCTTTCTTTGATGAGCTTCGCGAGCCGAATGCACGACTACCTAATGGCCGTCCACTGCCCCCGCTTTTCAACTTTAAACAGGAAATAGCTGGAGTATCACCTGAACTGATCAATAGGCTCATCCCAGAGCACGTTAGGCGGCAGACTGGTCTCAGCTTCCCGAATTCGGCTGGTACATAG 1251 0.4564 MASMPLGPHHHQPPLASAPSQPPQHPQPEVPRRSSDMETDKDMSSTVIVQNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGVVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETMYRVLKHYNNMNQRMPLIYVKLYTYQIFRGLAYIHTVSGVCHRDVKPQNLLVHPLTHQVKLCDFGSAKVLVKGETNISYICSRYYRAPELIFGATEYTTSVDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQVKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACTHPFFDELREPNARLPNGRPLPPLFNFKQEIAGVSPELINRLIPEHVRRQTGLSFPNSAGT 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0461 416 MobiDBLite consensus disorder prediction 1 47 - -
Lal1g0461 416 ProSitePatterns Protein kinases ATP-binding region signature. 82 106 IPR017441 GO:0005524
Lal1g0461 416 CDD STKc_GSK3 71 363 IPR039192 -
Lal1g0461 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Lal1g0461 416 Gene3D Transferase(Phosphotransferase) domain 1 156 403 - -
Lal1g0461 416 ProSiteProfiles Protein kinase domain profile. 76 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0461 416 MobiDBLite consensus disorder prediction 15 29 - -
Lal1g0461 416 SUPERFAMILY Protein kinase-like (PK-like) 75 385 IPR011009 -
Lal1g0461 416 SMART serkin_6 76 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0461 416 Gene3D Phosphorylase Kinase; domain 1 61 155 - -
Lal1g0461 416 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 35 408 - -
Lal1g0461 416 Pfam Protein kinase domain 76 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0461 416 PANTHER OS02G0236200 PROTEIN 35 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0461 Lal-Chr1 2891039 2896048 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0461 80 398 MAP Kinase Gene Family AT3G59790 34.431 1.73e-56 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Lal1g0461 Pkinase 3e-64 CL0016