Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0450 ATGGGTGTTGAGTATTACAAACTGTTGCAGGTTGATAAGAATGCTAAAGATGAAGAATTGAAGAAAGCTTATAGGAAACTCGCCATGAAATGGCACCCTGATAAGAATCCCAACAACAAAAAGGAAGCTGAAGCTAAGTTTAAGCAAATTTCTGAAGCCTACGAGGTGCTTAGTGATCCTCAGAAGAGAGCTATCTATGATCAATATGGGGAAGAAGGTTTGAAAGGTCAGGTACCCCCTCCTGATGCTGGTGGTAGTGGATCAACTTACTTCTCAACCGGAGATATCCCGGGATCCTTTCGATTCAATCCACGAAATGCTGATGACATATTTGCTGAGTTTTTTGGGTTCTCAAGCCCCTTTGGTGGGAGAGGTGGTGGCAGTGGCATGAGGTCCAGGTTCTCTGGTGGAATGTTTGGTGATGATATGTTTGGACCTTTTGGGGAAGGAGGAGGGATACATATGAGTCAAGGTGCACATCGAAAAGCACCTCCTATTGAGAACAAGTTGACCTGCACTCTGGAGGAGATATATAGAGGGACTACCAAGAAGATGAAGATCCATAGAGAAATTGCTGATGCCACAGGAAAAACCATGCAAGTGGAGGAGATCTTAACCATTAATGTTAAGCCTGGTTGGAAGAAGGGGACAAAGATCACCTTCCCAGAGAAAGGACATGAGCAACCAAATGTGACGCCTGCAGATCTTGTTTTCATCATCGATGAGAAGCCGCACAATGTCTTCACTCGAGATGGAAATGATCTTATTGTCAACCAGAAGATTTCTCTTGTGGAGGCCTTAACAGGTTATACAGTGAACCTCACTAGGCTGGATGGTACTAACTTAAGCATATCAATCAACAATATTATTCATCCCAACTATGAGGAGGTTGTCCCAAGAGAAGGAATGCCACTTCCAAAGGATCCTTCAAAGAAGGGAAACTTGAGAATAAAGTTCAGCATCAAATTCCCAACTCGGCTCACCGATGCACAGAAAGAAGGCATAAGGAAACTCTTGCCTTCTTCAGCCTGA 1032 0.438 MGVEYYKLLQVDKNAKDEELKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYEVLSDPQKRAIYDQYGEEGLKGQVPPPDAGGSGSTYFSTGDIPGSFRFNPRNADDIFAEFFGFSSPFGGRGGGSGMRSRFSGGMFGDDMFGPFGEGGGIHMSQGAHRKAPPIENKLTCTLEEIYRGTTKKMKIHREIADATGKTMQVEEILTINVKPGWKKGTKITFPEKGHEQPNVTPADLVFIIDEKPHNVFTRDGNDLIVNQKISLVEALTGYTVNLTRLDGTNLSISINNIIHPNYEEVVPREGMPLPKDPSKKGNLRIKFSIKFPTRLTDAQKEGIRKLLPSSA 343
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0450 343 PRINTS DnaJ domain signature 6 24 IPR001623 -
Lal1g0450 343 PRINTS DnaJ domain signature 24 39 IPR001623 -
Lal1g0450 343 PRINTS DnaJ domain signature 42 62 IPR001623 -
Lal1g0450 343 PRINTS DnaJ domain signature 62 81 IPR001623 -
Lal1g0450 343 SUPERFAMILY HSP40/DnaJ peptide-binding domain 161 256 IPR008971 GO:0006457|GO:0051082
Lal1g0450 343 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Lal1g0450 343 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 339 - -
Lal1g0450 343 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 339 - -
Lal1g0450 343 CDD DnaJ 4 59 IPR001623 -
Lal1g0450 343 Pfam DnaJ C terminal domain 166 324 IPR002939 -
Lal1g0450 343 SMART dnaj_3 3 62 IPR001623 -
Lal1g0450 343 Pfam DnaJ domain 4 67 IPR001623 -
Lal1g0450 343 SUPERFAMILY Chaperone J-domain 4 73 IPR036869 -
Lal1g0450 343 Gene3D - 165 243 - -
Lal1g0450 343 CDD DnaJ_C 164 327 - -
Lal1g0450 343 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Lal1g0450 343 Gene3D DnaJ domain 3 125 IPR036869 -
Lal1g0450 343 Gene3D - 245 325 - -
Lal1g0450 343 SUPERFAMILY HSP40/DnaJ peptide-binding domain 247 333 IPR008971 GO:0006457|GO:0051082
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal1g0450 Lal-Chr1 2818430 2821219 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0450 5 69 C2H2 Transcription Factor Family AT1G74250 40.580 6.89e-10 58.5
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0450 K09510 - gmx:100778672 538.88