Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0447 ATGGGGTTTTTGTTGAAGGAAGCTTTGAAAACTCTCTGTGCTCGGAATCAGTGGTCTTATGCTGTGTTCTGGAAGATCGGTTGCAACAATCCAAAGTTGTTAATATGGGAAGATTGCTATTATGAACCATTGCCATCTAATTTCCCTCCTTGTATTATTGGGACGTCTAATTTGCCTTACCAAGATGGGGAAAGATGCTGGTTTTCTTCCGAGTCTCAGCTGGGGGTTCAAGAAGAGGATAAAGTATGTTCTTTGATTAACAAAATGGTGGTGAATAGTTCAGTCAATATCATTGGTGAAGGGATAATTGGACGGGCAGCATTTGCAGGAAATCATATGTGGATTCTTCTGAACAATTTCACTAGAGATGCATGTCCACATGAGGTATATACTGAGTTGCATTACCAATTTTCAGCTGGAATACAGACACTAGCTGTTATTCCTGTGCTTCCACATGGGGTTGTTCAACTTGGTTCTTTCTTGCCAATAATGGAAAATATAGGATTTGTGAATGACACAAAGAGCTTGATCTTGCAATTGGCATGTATTCCTGGTGTCCTTCTATCTGATGACTATTCAGCAAAACTTTCTTCCGAAAGACTTGCTGGACCTGTGACCGATTGTGTGCCACTGACTGTTGACCCACCAGTCGTTAGCTCTAACTTCACTCCCTCTGTAACTAATGGTTCCAATGAAATAAGTAATTTCTCTCATGCTTCTTCAAGGCCTATTGCTCAACCCGTAAATAATTACCAGGGTTCTGTATTGACACCTCAAATGCAGAACCAAAACAAGATATCATCCAAGTACCATGACAATCCTTACCACCCAACAGCTCATTCAATAAATAGAACAAGTGTCAGTACCCAACAAGAGAATAGAGTTGTCGTGGCTAGAGCCGAAGTAATACCCTCAAATCTTGATTCGTATATGCAGCAGTCTTCTGCTGCATATAATACAAGATATGCATTCAATGAATTAGCTGGTTTTGGCCAATCAAACTTCAGTGATGGCAGCCTTAAATATATGGAACAACAAATCTTATCAAGTGTTGGGACACAAGTTCATGTTAATCCTAATATGAACCCATCGAGTACCTATAATATTTCCCAATTGAAAAGAGATGGAAGCCATATTCTTCAACAGACCCAGAGTTGTGTTAGTAATTCAATACTTGGAGGAATTCCAATCCACAATAGGATGAGTAATCTTTTGCGGACAAATATGTTTAACAGCTCTGTTTCAAACTCTCCCAAAGTATCCACCACTGATTTTTCTGGAATACAAAAAGTTAGAGTGGGACTTCAAAATGATAATTCAACTACAGCTGGGACTTATTCTCTGCCTAATTTGACTAACCAAACAGTTGCTACTCATATGCATCTAGAAGGTTCTCATCAGAAGAATCTTCCCACAGATTTAAATCACGCTCATGATGTTTTGGCTGCAACAGATCAAAGGATTGATGATGATTTGCTTCAGGCCTTTAAAATCCCATCTCTTCATCTTGAGGAGCATGTGGCTATGAGTGACCACATCCCTGATTTAGTTCATGATCACCTTAATGAAGATGCTTCCAGTCAACATATGATGAAAATGAATGCTAAGCATGAAGCTAGTGCTCAACTTCCATCAGACGATGACCTATTTGATGTTTTAGGTATGGATTTCAAAAGAAAACTGCTGAATGGAAACTGGGATGAGTTGCTTGCTGATGAAAATATTGATAAAAAGGCAACATGCATGAACATGCAGGCTATAGATCCGGATAATATTTATTCAGTTAGTGAAGCAGTATCAGACAGTGGCATCTTCTCTGGGTCAGGCACAGACCACCTCTTAGATGCTGTGGTTTCAAGGGCTCAATCTGCTTCAAAACAGAATTCTGATATGTCTTGCAGAACAACATTGACAAGGATTAATACCACTTCTGTTCCCTCTCCTGCCTCTAAGCAGGTTATGCCTGATAATGTTGTCAAGGGAAAAGTGATTGATTTCCCTAAGATGGATGGTAAAATAGGCGCTGCACAAACTAGTTCTCTTAAATCTGTGTGTAGCAAGGATGATGCTGGAAACTGTTCTCAAACTACTTCCGTATATGGGTCTCAACTTAGTTCATGGGTTGAGAAAGTTAACAATGTGAAGCATGAAAGTAGCGTTTCCACTGGATATTCTAAGCGGCCTGATGAAGGTTGCAAGTCCAACCGGAAAAGGCTTAAACCTGGAGAGAACCCCAGGCCTAGACCAAAAGATCGCCAAATGATTCAAGATCGTGTGAAAGAGTTGCGAGAAATTGTGCCCAATGGAGCAAAATGTAGTATAGATGCACTTTTGGAAAGGACCATCAAGCATATGCTTTTCTTGCAAAGTGTAACAAAGCATGCTGACAAGCTGAAACAGACTGGGGAGTCAAAGATTATTAGCAAGGAAGGTGGATTGCTTTTAAAAGATAACTTTGACGGAGGGGCTACATGGGCATATGAGGTTGGTTCACAATCAATGGTTTGCCCTATCATAGTGGAGGATCTGAATCCTCCTGGTCAGATGCTAGTCGAGATGCTTTGTGAGGAACGTGGTTTCTTTCTTGAAATAGCCGACTTAATCAGAGGATTAGGTTTAACCATCTTGAAAGGTGTCATGGAAGCTCGTAATGACAAGATCTGGGCACACTTTGTTGTTGAGGCAAACAGAGACGTGACGAGGATGGAAATATTTATGTCACTGGTTCGTCTTTTGGAGCAAACGGTGAAGGGTGGTGCATCTTCATCGAATGCAATTGATAACAACATGATGGTTCATCATTCTTTCCCACAAACTACCCATATAGCAGCATCCGGTAGGCCTAGTAGTTTGCAATGA 2859 0.4057 MGFLLKEALKTLCARNQWSYAVFWKIGCNNPKLLIWEDCYYEPLPSNFPPCIIGTSNLPYQDGERCWFSSESQLGVQEEDKVCSLINKMVVNSSVNIIGEGIIGRAAFAGNHMWILLNNFTRDACPHEVYTELHYQFSAGIQTLAVIPVLPHGVVQLGSFLPIMENIGFVNDTKSLILQLACIPGVLLSDDYSAKLSSERLAGPVTDCVPLTVDPPVVSSNFTPSVTNGSNEISNFSHASSRPIAQPVNNYQGSVLTPQMQNQNKISSKYHDNPYHPTAHSINRTSVSTQQENRVVVARAEVIPSNLDSYMQQSSAAYNTRYAFNELAGFGQSNFSDGSLKYMEQQILSSVGTQVHVNPNMNPSSTYNISQLKRDGSHILQQTQSCVSNSILGGIPIHNRMSNLLRTNMFNSSVSNSPKVSTTDFSGIQKVRVGLQNDNSTTAGTYSLPNLTNQTVATHMHLEGSHQKNLPTDLNHAHDVLAATDQRIDDDLLQAFKIPSLHLEEHVAMSDHIPDLVHDHLNEDASSQHMMKMNAKHEASAQLPSDDDLFDVLGMDFKRKLLNGNWDELLADENIDKKATCMNMQAIDPDNIYSVSEAVSDSGIFSGSGTDHLLDAVVSRAQSASKQNSDMSCRTTLTRINTTSVPSPASKQVMPDNVVKGKVIDFPKMDGKIGAAQTSSLKSVCSKDDAGNCSQTTSVYGSQLSSWVEKVNNVKHESSVSTGYSKRPDEGCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIISKEGGLLLKDNFDGGATWAYEVGSQSMVCPIIVEDLNPPGQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWAHFVVEANRDVTRMEIFMSLVRLLEQTVKGGASSSNAIDNNMMVHHSFPQTTHIAASGRPSSLQ 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0447 952 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 952 - -
Lal1g0447 952 MobiDBLite consensus disorder prediction 717 754 - -
Lal1g0447 952 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 952 IPR043561 GO:0003700|GO:0006355
Lal1g0447 952 MobiDBLite consensus disorder prediction 729 754 - -
Lal1g0447 952 CDD bHLH_AtLHW_like 743 812 - -
Lal1g0447 952 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 739 788 IPR011598 GO:0046983
Lal1g0447 952 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 176 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0447 Lal-Chr1 2774853 2783113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0447 522 927 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 52.392 1.75e-120 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0447 - - aprc:113857443 1365.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0447 1 2774853 2783113 Lal1g0447 1 2774853 2783113 ECH
Lal1g0447 1 2774853 2783113 Lal2g0381 2 2258468 2264925 LSH
Lal1g0447 1 2774853 2783113 Lal9g0344 9 2271904 2278477 LSH