Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0429 ATGGATAGCCAAAGAATAGGACAAATGAGGTTATCTGAGTCAGGACCATCAAATCACCATGTCCCTTATGGAGTTCTTCATCATGGGATTAATATTCCTACATCAAGTTTAATGAATCAAGGGTCTGCTTTTGATTTTAGAGAGCTGGAAGAGGCAATGGTTCTACAAGGAATAAAAACTAGAAATGATGAAGCAAAAACAGCTTTATTCACAGGCAAGCCTGCAGCTACACTGGAAATGTTCCCTTCATGGCCAATGAGATTCCACCAAACCCCCAGAGGAAGTTCAAAGTCAGGAGGGGAAAGCACTGACACTATTTGTTCAAGCAAAACAACTGAGCCACTACAGTTTGAAACAGAATCTCCAATAAGTAAGAAAGCATCTTCTTCAGAACAACATCATCTTATGCAACAAAGACAGAACCAACTTCAACAACAAGAGATCATGCCAATTGTTACCTCAAGAACAGGCCCATTATCACAGAATCAATCAGCTTCAAAAACAACAATACAGGATAAGAGGAAGGGAGCTAGTTCCACATCAGAGAAACCACTTGATGCAAAGACACTGAGACGTTTAGCACAGAACAGAGAGGCAGCAAAGAAAAGCCGTCTAAGGAAAAAGGCTTATGTGCAGCAACTAGAGTCAAGTAGATTAAAGCTTAACCAACTTGAACAAGACCTTCAAAGAGCACGTTCTCAGGGAATGTTATTGGGTTGTGGTGGTACTGGTAGCAATATAAGCTCTGGGGCTGCAATGTTTGACATGGAGTATGGTAGATGGTTAGAAGATGACCACCGGCTGATGGCGGAGCTCCGGACGGGGTTACAGGCGGCGGTATCGGACAACGAGCTGAGAGTGATAGTAGATGGATATCTTGGTCACTATGATGAGATATTCCGGTTGAAGGGAGTGGTTGCTAAAACAGATGTATTTCACCTTATTAATGGTATGTGGAGGTCCCAAGCTGAACGATGCTTCCTATGGATTGGTGGTTTTAGGCCCTCAGACCTTATCACTATGTTGATACAACAGTTGGAGCCACTAGCGGAGCAACAGATAATGGGTATGTATGGGCTAAGGCATTCATCACACCAAGCGGAGGAAGCACTGTCTCAAGGCCTTGAACAGCTTCAGCAGTCTCTCCTTCAAACCATCTCCGGCGGCCCCGTCATTGACGGTGTTCAACAGATGATGGTCGCCATGGCCAAGCTTTCCAACCTTGAAGGCTTTGTACGTCAGGCTGATAATTTGAGACAACAAAGCCTCCATCAAATATGTCGGTTATTGACAATTCGTCAAGCGGCAAGGTGTTTTCTTGTGATTGGAGAATATTATGCTCGTCTTCGAGCTCTTAGTTCTCTTTGGGCATCAAGACCACGAGAGACCTTGATGATGGATGATAACTCATGTCAAACAACCACTGACTTGCAAATGGTTCAATCTTCTCAAAATCATTTCCCAAGTTTCTGA 1473 0.4372 MDSQRIGQMRLSESGPSNHHVPYGVLHHGINIPTSSLMNQGSAFDFRELEEAMVLQGIKTRNDEAKTALFTGKPAATLEMFPSWPMRFHQTPRGSSKSGGESTDTICSSKTTEPLQFETESPISKKASSSEQHHLMQQRQNQLQQQEIMPIVTSRTGPLSQNQSASKTTIQDKRKGASSTSEKPLDAKTLRRLAQNREAAKKSRLRKKAYVQQLESSRLKLNQLEQDLQRARSQGMLLGCGGTGSNISSGAAMFDMEYGRWLEDDHRLMAELRTGLQAAVSDNELRVIVDGYLGHYDEIFRLKGVVAKTDVFHLINGMWRSQAERCFLWIGGFRPSDLITMLIQQLEPLAEQQIMGMYGLRHSSHQAEEALSQGLEQLQQSLLQTISGGPVIDGVQQMMVAMAKLSNLEGFVRQADNLRQQSLHQICRLLTIRQAARCFLVIGEYYARLRALSSLWASRPRETLMMDDNSCQTTTDLQMVQSSQNHFPSF 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0429 490 PANTHER TRANSCRIPTION FACTOR TGA9 66 469 - -
Lal1g0429 490 MobiDBLite consensus disorder prediction 85 190 - -
Lal1g0429 490 SMART brlzneu 184 249 IPR004827 GO:0003700|GO:0006355
Lal1g0429 490 MobiDBLite consensus disorder prediction 89 175 - -
Lal1g0429 490 MobiDBLite consensus disorder prediction 176 190 - -
Lal1g0429 490 CDD bZIP_HBP1b-like 188 239 - -
Lal1g0429 490 PANTHER TRANSCRIPTION FACTOR TGA9 66 469 - -
Lal1g0429 490 Pfam bZIP transcription factor 187 228 IPR004827 GO:0003700|GO:0006355
Lal1g0429 490 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 191 206 IPR004827 GO:0003700|GO:0006355
Lal1g0429 490 Pfam Seed dormancy control 269 343 IPR025422 GO:0006351|GO:0043565
Lal1g0429 490 Coils Coil 207 234 - -
Lal1g0429 490 ProSiteProfiles DOG1 domain profile. 251 459 IPR025422 GO:0006351|GO:0043565
Lal1g0429 490 SUPERFAMILY Leucine zipper domain 188 230 IPR046347 GO:0003700|GO:0006355
Lal1g0429 490 Gene3D - 187 238 - -
Lal1g0429 490 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 186 230 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0429 Lal-Chr1 2675759 2684237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0429 130 490 bZIP Transcription Factor Family AT1G08320 69.146 0.0 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal1g0429 DOG1 2.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0429 K14431 - gmx:100775461 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0429 1 2675759 2684237 Lal1g0429 1 2675759 2684237 ECH
Lal1g0429 1 2675759 2684237 Lal9g0328 9 2188579 2195441 LSH