Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0390 ATGAAGCTGCAGCTCAAATTTGCTTTTGCTTTTGCTATTAGCTTGCACTGGATTCGACACTCATTCTGTGACGAACCTTCTAATACCTCTGTCCTAAGCAAGTGGAAATGTAGATGTTCTTCCTTCCAAGGGAACCAAATCTACCCTCTTGCTAATTGTTCTAGGTCATGTGATTGCCATTCAGATGCAGAGGAGAGTGCATCCATACGGACATGCATATGTGATCCTGATCGGTTTCCCGAAGTGGCAGCTGATGGTGATAGCCCTAAATGCTTTACTGCCTGCAACTGCACCTGGGGTACTGTCAGTATGTCAATAGGTCCAAAGAAACAAATTCCTAGCAAGATTGTTGTAGTTATTCTATTAATATGTGTTTTGTTCACAACCCTTGCGTTTCTGGTCTCAGTTATATTTTATGTTTACCGAAGAGATAGATGTCCTATTCAATCCTCATCAGGTAAGGAAACAAGCCGTGATAGTACAACCAACTTAATTAGTCATAGGACAGAGGCATCTTCAGTGCCAGAAACAAGAGTTACCAAAATCCTCCTATTTGTCAAATTACAGGTGAGATTCTTTCCTGAAGCCTCTTTTATGTTCAGGAGCCAAAAAGAAACTTTTCATGGAAATATTATTCAATTTTCGTTTGATGTACTAGAGAATGCCACTGAAAACTTTTCAGCCTCCAACCTAATTGGATCAGGTGGAAGTAGTTATGTATACCGTGGTCGGCTGAAAAATGGTAGTAATGTGGCAGTCAAGCGACTAAAAGATCAAGGAGGGCCAGATGCAGACTCGGCATTTTTCAAAGAGATTGAACTATTATCTAGACTTCATCATTGTCATATAGTGCATTTACTTGGATACTGTTCAGAATTAAAAGGAAAACTTGTTCAGAGGTTACTGGTATTTGAGTACATTGCTCATGGAAATCTGAGGGACTGTTTGGATGGAGTTGCTGGAAACAATTTGGATTGGGCTACTCGTGTTACAATTGCAATAGGAGCTGCAAGGGGCTTGGAATATCTACATGAAGCAGCTGCTCCGAGAATTCTTCATAGAGATGTTAAATCATCAAACATTCTTCTGGATGAAAATTGGCATGCAAAGGCACGAATAGCTGATCTTGGTATGGCCAAAAGCTTGAGATCCGGTGATCTCTCCAGCGGTTCAAATTCTCCAGCTAGAATGCAGGGAACATTTGGCTATTACGCACCTGAGTATGCTATTGTTGGGAGAGCCTCTCTTGAGTCAGATGTCTTCAGTTTTGGGGTGGTTCTTCTTGAGCTTATCAGTGGCCGGAATCCCATCCATAAATCTACGGGCAAACAAGAAAGCCTTGTCATATGGGCGGCTCCACGTTTACAGGATAGTAGGCGAATCATAACGGAGTTGATTGATCCAAAATTGAACGGAAACTTCCCAGAAGAAGAGGTGCAAATAATGGCATACTTAGCAAGGGAGTGTTTGCTGTTGGATCCTGACACTCGACCAAGCATGAGTGAGGTCGTTCAAATTCTTTCTACTATCTCCCCTGACAAATCTAGGAGAAGAAGAAATATTTCCGCGAGCCTGTTTCGGGTGAACACATTTACTGAACAAGAGGATGCAGAGAAGCAAAGACAAGCTCTATCTCATAGTTCATTGACACTAGATATTGATCCCAAAAATAAAGAAGCAAATGAGCATGAAGAGAATTTTACGCTCTTGACATCAAAAACTAAAGGATGGCATACATCAGAAGAAGAAATGGTAGACCTGACCGAACCTTGGTTTGAATCATTTTGCATGGCAAATGTTTGCTCCCCCTAA 1812 0.4145 MKLQLKFAFAFAISLHWIRHSFCDEPSNTSVLSKWKCRCSSFQGNQIYPLANCSRSCDCHSDAEESASIRTCICDPDRFPEVAADGDSPKCFTACNCTWGTVSMSIGPKKQIPSKIVVVILLICVLFTTLAFLVSVIFYVYRRDRCPIQSSSGKETSRDSTTNLISHRTEASSVPETRVTKILLFVKLQVRFFPEASFMFRSQKETFHGNIIQFSFDVLENATENFSASNLIGSGGSSYVYRGRLKNGSNVAVKRLKDQGGPDADSAFFKEIELLSRLHHCHIVHLLGYCSELKGKLVQRLLVFEYIAHGNLRDCLDGVAGNNLDWATRVTIAIGAARGLEYLHEAAAPRILHRDVKSSNILLDENWHAKARIADLGMAKSLRSGDLSSGSNSPARMQGTFGYYAPEYAIVGRASLESDVFSFGVVLLELISGRNPIHKSTGKQESLVIWAAPRLQDSRRIITELIDPKLNGNFPEEEVQIMAYLARECLLLDPDTRPSMSEVVQILSTISPDKSRRRRNISASLFRVNTFTEQEDAEKQRQALSHSSLTLDIDPKNKEANEHEENFTLLTSKTKGWHTSEEEMVDLTEPWFESFCMANVCSP 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0390 603 CDD STKc_IRAK 232 507 - -
Lal1g0390 603 ProSiteProfiles Protein kinase domain profile. 226 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0390 603 Gene3D Transferase(Phosphotransferase) domain 1 307 532 - -
Lal1g0390 603 Pfam Protein kinase domain 228 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0390 603 SMART serkin_6 226 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0390 603 MobiDBLite consensus disorder prediction 541 564 - -
Lal1g0390 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 351 363 IPR008271 GO:0004672|GO:0006468
Lal1g0390 603 SUPERFAMILY Protein kinase-like (PK-like) 206 507 IPR011009 -
Lal1g0390 603 ProSitePatterns Protein kinases ATP-binding region signature. 232 254 IPR017441 GO:0005524
Lal1g0390 603 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 2 597 - -
Lal1g0390 603 PANTHER OS01G0253100 PROTEIN 2 597 IPR045271 GO:0004714|GO:0006468
Lal1g0390 603 Gene3D Phosphorylase Kinase; domain 1 198 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0390 Lal-Chr1 2387304 2393120 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0390 1 600 Receptor kinase-like Gene Family AT2G28250 49.918 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Lal1g0390 Pkinase 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0390 - - lang:109351663 879.011