Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0388 ATGATGTTACGGTATGATAATGGAAACGTAAATGGCAGCGTTTCGGTGGATCCGTTGATGTGGGGTGTAGCGGCGGAGTCGATGAAGGGGAGCCACGTGGAGGAGGTGAAGGAGATGGTGAGAGAGTATAGGAAGGGGGTGGTGAGGGTGGGAGGGATAACATTGACGGTGGGGCAGGTGGCGGCGGTGGCGGAGAGAAGGGTGAAGGTGGAACTGAATGAGGAAGTGAAAGTGAGAGTGAAAGAGAGTAGTGAGTGGGTGATGGAGAGTGTGAAGAAAGGAACAGATAGTTATGGAGTCACAACTGGGTTTGGTGCTACTTCACATAGGAGAACCACTCAGGGTGTGGCTCTTCAAGCTGAACTCATTAGGTTTTTGAATGCTGGAATTTTCGGAAATGGTGCAGAAGCTTGCCATATTTTGCCAAACAATGCAACAAGAGCTGCAATGCTGGTAAGAATCAATACTCTCCTTCAAGGCTACTCTGGCATCAGATTTGAGATACTAGAAGCCATTGTGAAACTTCTCAACCATAACATAACACCGCTCTTGCCCTTGCGCGGTTCAATATCGGCCTCAGGTGACTTGGTTCCATTTTCATACATAGCTGCACTCCTCATAGGAAGGCCTAATTCAAAGGCTGTTGGACCCAATGGTGAGTCCCTAAGTGCTGCAGAAGCATTCCATCTAGCTAATATTGGTAAGGACTTCTTTGAGTTGCAGCCTAAGGAGGGTCTTGCACTTGTTAATGGAACTGGTGTTGGAGCTGGTTTGGCATCACTAGTTCTGTTTGAGGCTAACATCTTAACCATCTTGTCTGAAGTCATGTCAGCAATTTTTGCTGAAGTTATGCAAGGGAAACCGGAGTTTACGGACCATTTGACACATAAACTGAAGCATCATCCTGGTCAGATTGAAGCTGCTGCAATCATGGAACACATCTTGAATGGAAGTATTTATGTTAAAGAAGCACACAATTTACAGGAGATAGATCCTCTCCAAAAACCTAAGCAAGATAGATATGCTCTTCGAACTTCACCACAATGGTTAGGTCCTCAAATTGAAGTTATCCGGTCATCGACAAAATCCATCGAAAGGGAGATAAACTCGGTGAATGACAACCCTTTGATTGATGTGTCAAGGAACAAAGCTTTGCATGGTGGCAATTTTCAAGGTACTCCTGTTGGAGTTTCAATGGACAACACAAGACTAGCATTGGCTGCAATTGGAAAACTTCTTTTTGCTCAGATGTCCGAACTGGTTAATGATTTCTACAATAATGGGTTGTCTTCAAATCTCTCAGGGGGTCGCTGTCCAAGTTTGGATTATGGATTCAAGGGGGGCGAGATAGCAATGGCATCATATTGTTCTGAGCTTCAGTATCTGGCAAACCCGGTTACTACTCATGTGCAAAGTGCAGAACAACACAACCAAGATGTGAACTCATTGGGATTAATCTCAGCTAGAAAAACAGCTGAAGCTGTAGAAATATTGAAGCTCATGTCTTCAACCTACCTCGTCGCACTTTGCCAAGCTATAGATTTGAGGCACTTGGAGGAGAACTTAAAGAACACAGTTAAAATTGCTGTGAGCCAAGCAGCTAAAAAGGTCTTGATTCTAGGCATCAATGGAGAGCTTCATCCCTCGAGATTCTGTGAGAAAGATTTGCTCAAAGTGATTGACCACGAGTACGTTTTTGACTACATTGATGACCCTTGTAATGCTACATATCCACTTATGCAAAAACTAAGGCAAGTGCTTCTTGAGCATGCATTGCTCAGTAATGATGCTTTGAACTTGCTGAAGATCAGTGCCTTTGAGGAGATACTGAAGACAGTGCTGCCTAAAGAAGTTGAATCTACAAGGGTTGCCTTTGAGAAAGGGTGTTCACAAAGTCCTAACAAAATTAAGGAGTGCAGGTCCTATCCACTCTATAAGTTTATCAGGGAGGAATTAGAGACTGAGTTTCTCACTGGTGAAAAAATTAAGTCCCCAGGAGAAGATTTTGAAAAAGTTTTCAGTGCAATTAATCAAGGAAAAATAATAGACCCAATGTTTGAATGCATTAAGGATTGGGATGGTGCTCCTCTTCCCATTTGTGGGAGCCACTGA 2112 0.4366 MMLRYDNGNVNGSVSVDPLMWGVAAESMKGSHVEEVKEMVREYRKGVVRVGGITLTVGQVAAVAERRVKVELNEEVKVRVKESSEWVMESVKKGTDSYGVTTGFGATSHRRTTQGVALQAELIRFLNAGIFGNGAEACHILPNNATRAAMLVRINTLLQGYSGIRFEILEAIVKLLNHNITPLLPLRGSISASGDLVPFSYIAALLIGRPNSKAVGPNGESLSAAEAFHLANIGKDFFELQPKEGLALVNGTGVGAGLASLVLFEANILTILSEVMSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILNGSIYVKEAHNLQEIDPLQKPKQDRYALRTSPQWLGPQIEVIRSSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPVGVSMDNTRLALAAIGKLLFAQMSELVNDFYNNGLSSNLSGGRCPSLDYGFKGGEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISARKTAEAVEILKLMSSTYLVALCQAIDLRHLEENLKNTVKIAVSQAAKKVLILGINGELHPSRFCEKDLLKVIDHEYVFDYIDDPCNATYPLMQKLRQVLLEHALLSNDALNLLKISAFEEILKTVLPKEVESTRVAFEKGCSQSPNKIKECRSYPLYKFIREELETEFLTGEKIKSPGEDFEKVFSAINQGKIIDPMFECIKDWDGAPLPICGSH 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0388 703 Gene3D - 519 634 IPR023144 -
Lal1g0388 703 Gene3D - 9 252 IPR024083 -
Lal1g0388 703 SUPERFAMILY L-aspartase-like 17 700 IPR008948 GO:0003824
Lal1g0388 703 PANTHER HISTIDINE AMMONIA-LYASE 10 700 IPR001106 -
Lal1g0388 703 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 17 690 IPR005922 GO:0005737|GO:0006559|GO:0016841
Lal1g0388 703 Gene3D Fumarase/aspartase (Central domain) 254 694 - -
Lal1g0388 703 Pfam Aromatic amino acid lyase 55 521 IPR001106 -
Lal1g0388 703 CDD PAL-HAL 54 516 IPR001106 -
Lal1g0388 703 PANTHER AMMONIA-LYASE, PUTATIVE-RELATED 10 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0388 Lal-Chr1 2373516 2376731 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0388 17 700 Monolignol Biosynthesis Gene Families AT2G37040 75.434 0.0 1106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0388 K10775 - vvi:100241575 1092.03