Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0387 ATGACAAGGTCGACATTATCAAAGAAAATGGCTTCCAGTAGTCGGAATCGCGAGTCTGAGCGAAATTTGAAGAGGAAGGAAGCGCCGCCATGTGTGGGAGTTAGAACTAAATCAACGAAGAAGCAGAAGAAGATTACAACACAAGTAGCCACTCCTCTCGTTCTCAGGAGATCTGAGAGAACTAGGAATCTTTCTTCTTCAATGTCTCAGATGAAGAAACCAAAACAACAAGAGAATGAAGATGACGAGGATGAGGAACGTGATGTAGAAGCAGAAGCAGTTCAAATCAAGAGAAAAATGAATGCTCGTATCTACAAAAATATGTTTAGAAATCCTAAAAGAGATTGCAATCCAGAGTCAAAAAAGATTGGTAAGTCAATTCGGGAAGGTGGTAACAGTAGTGGAGGCAAGATTGATGAGGATTTTGAGGGGAATCCTGTAGACCATAAAGAAGTCTCCAAGGATAACAAAGGCGAAGAAGTCTCCAAGGACGTTATCATACCATCTGAGGAAGGTCAAGGCGAAGAAGTCTCCAAGGGCGGTAAAATACCATCTGAAGATAAAAAAGCCGAAGAAGTCTTCAAGGACTGTATACTACCATCTGAAGAGGGCAAAGCCAAAGTGTTGAGAGCTGAATCTAGGTTGAGTGAGCCCATGAAGGATCAATTAGAAAATAGTGTCACTCTAGCTTCATGGATAACATCTAATGCCACAGCTCATGAGACTAGTGGGGAAACTGGAAGGGTTCAGTCTGATTGCCGTGAAGAGGATACAATAGAGATGCAAGAGTCGAGAAATTCCATGTTGAATAAAAGTTTGATTAAGAACTGTGTTGAGCTCGATAAGGGTGAAAACTCAATATCTTCTAAGAGAAGAGAAACTATGGTGGACATGCATTCAGATGTTTCTGCTACATTGGTTAATGATGACAATGACAACTTGATTGCTGATGCTAGTCCTTCAACGAATACTGTGGGGACAAGCGAGTCATCTTCCAAAAGGATAAGGCCGACCTCTTTATCAGATTTGCAGAGGAATCAGACGAAATTGATCAATAATGTTGATCAATCGTCTTCAATGTCTGAAGGTGAAAAGTTATATCCTGGATACAAGGGAGGTAAATCTGGAGATCCAGTAGAGAGACCCCAAAGTAGCAATGATGAAGTAAGGAAACAACAAAGGAGCTTACATCTTTTACTGAAGCCAGGGATAGCAATGCTTTGCGAAGTTCTTCGTTTCCCTGTTCCCGACTTCCCATCTCCCTGTATGCTTGATAGTCCTCTGACATTTTGTTTAGAGGGTGAGATTGGCGCAACGGTAAAGTTGCTGCTTAGTGACCATAAGGACACTGTCAAGAGAATGGTTGATAATTGTCTTGAATATATTATGAACAATCGTCAGATCTGTACAGAACCAGTGTCAATATTTCAGGCTTTTCAATTATCTCTGTGTTGGACTGCTGCTGATTTGCTAAAGCACAAACTTGACCGTGAAGATTCCTTCATGCTTGCAAAAGGGCATTTGAATTTTCATTGCAAGATAGAAGAGGTGTACGAAATTCATAGAATGATGCGGAAACTGAAGAAAGACTTTTTATACCACACAGGGAACTATAATGTATCTAGCTCTCCAAAAGCTTCTGAATCATCATGCAGGGTTTATTCCAATACAGGAGTTGCACCAAAAGTGGAAATGACCTGCACAGATATTTCCAGAAGTAGTGAAGTTAAGCAACTTTTGTTGCGACAGGAGGAGGCTAAAAAAAAGTTGGAAGCTGATATTGAAAGGAAAAAGGCTGATTTTGAGATAAGGTGTAGAATAGAGTTAGCTGCTTATCTAGCCTTTTCACGCAATGATGTGACGAGAACAGAAAAGGTCAAGGTTTTCAATAGCGAGTATAGTAAAAGAATTGGAGAATTGAAAAGGCAGCATGAAACACAACTCAAGGATCTCGAGGCCAGGCAATTAGAAGAAAGGCGGAAGTTCCAAGAGTCTTCGCCACCCCATGAATCTTGTAGTGGTTCTGGGCGGGATATTGCAACACTGGTTCCATTTTCATCTAATGGAGAGACGTGTGATGGCAAAATTTCAGATACTCCCAGTGGAGAGGTGGCTCTTGCATTGCACAAATCCCACTGTTCAAATGGTCCGGATGAAATTTCTACTTCTAGTCTAGGGAAACCTGATGGGACTATGTTGAGCAAACCTGTTTATGACTGCTCCGTAGAAACCAGGCTTAATGGTCCAAAGAATATGGTCTCCTTGAATTCACAGTCAACTGAAGAGCATATCCCAAGTGCAATTATCACTTCATCGTCAAATTGTGACAATACTGCCCAAATCCATGGGGCTAATGATGGCAGTGGTTCAAATAATGTTTGCACTCTGGATTCACCTTTGTCTGTTGAAAGAATTGCCTCCTTGAATTCGAAACCACCTCAAGAACATGCCCACGGTGTAAATGCTAAATGCATGCCAAATTGTGAAAATTCTGCACAGATCTACGTGGTTGGTGATGACCCTGTTTCAAATACTGCAAATATTGCTGCCACTCTGAATTTACCTTTGACTGATGAGAGAATTGCCGATGGGACCATAAGTTTATTAGATATGGAGGTAGGCGCGGAAATGCCTGCCACTGTCAGTTTTACTGATTGTCCAGAAAATGTTACTGCTATGAATCCTCTTTTGCCTATTGAGCAAATGTCTGGAGGTTTAGTAAAAGTCTCTGTTTCTGATAGGGACTTGTCAAGGTCATGTGGAACTGCTAGTCCAGGTAACAGTAATGATGGTAATCATATCACTCTTTTGAATCAACTTTCTTCAGAGGAACCACATCTTGATGCAGTCCCGTTAAGGATATCTGCTGGACAAATCCATGAAGTGCCAGAGACTAGCCATGAAGTGGTCACAGTTAGTGTAGTAGATAAGGAGGCGCCCATGGGAAATCCTGGCGCAGTCAATTGTACTGATCATCCAGAGAATGTAACTCCTTTGAATTCCTCAGCCATGTGTCAAATATCTGATGGAGATTTATCATCAAGGCCTTCCTGGGCTTCTAGTTCGTGCGTTGGTCCAGCTACAGTTTCCCTTTTGAATCCACCTTCTTTAGAGCAACAAATTCCTGATAAAGACTTGTTTAAAATACCTGATGAACAAATTCGGATGATGGTTCTAGAAACTAACCATGATAGTCTCATTGAGCCTCTAGAAAAAATGCACCCATTATCATCTGTTGAGTCTTCTCCTGACCAGGATACAGATAGAGAAATGCTGAGTTCTTTGCTATCTAGTCCAGTTGATATTGTACCAGCTAATCAATCCAATCATGTTTCATTGGTCACAGAGCCTCCAGAGGAGGTGCAACAGCAATCCCCTTCGGCAAATTTCCTTTCTTCCAACTGGGACCTATCTGACATGCCCTTTGCTGGAACTGAACATCAGCCAACCAATGAAGATGCACTCTCCAGCCCTATTCCTGAGATATCAACTGAGGTGCCAAATCAAGCTGTTGAGCAACCTGCCTCATATTTGGAACTTGATTCACCTATGCCTGGTGGTGTAAGAACACAGTCTTCAGACACAAGGAATTTCTCAACTCCCTCAGAGATCAATCAGCATTCTATACAAAGCGCAACCCATCCAACTTCCATGATTGTTCCGCCTTTGTGTCGTGATCCACTTGTAAATGAAGTTGAAAGAATAAGTAAACTGACAGACCTAAATATGAAAAACCATGAAGATATGCAATTAACAACTGCTATATTTTTCCTGTCGGAGCAGAAATTGCAGTTGAAATCTGATTTTGAGAAAGAATTTGAGGAGCTTCACAGGAAATATGAGATTAAAATTAAGGAGATTGATGTTGGATTTCAGCAAACAAAGAAGAAACTTGATACAGATCATAAAACTGTTCTTTTAAATAAGATATTGGCAGAGGCTTTTAGTCTTAAATACATGGAAGTTAGAGCATCTGGTGCATCTGGAGTGCAGCAAGGTGCAAGTTCTGCACAACAATCATGGCAGCTTTCAAGACCACAAGTTACTACTCGTCCTTCTCTAGTTTTTGGTCAATCTTCCTGTGCACCCCCTGCAGCTAGTCTGCTAAGCTCCTACATTACAACTAGCTCTCAGAATGCGCTACCACCAACTATACAGGCCACTCCCAATACATCGGGAATTTTCTCCAGTTTTTCTCCAAGACTACCAAATATCAACTCCATTTCTTCACCCTCAAATCCTCATGCCGGTGGGGAGATGCGCGCCACTGCACCACATCTGCAGCCTTATAGACCCGCAACAGCTGTGCCATCCCCCAGCCTCAGTACAGTCCCACATGGGATGCCAATTCAGCCTGCACCTGGTAACATACCAGTAACTTCCACATTTTCTCACTGGCCAGCAACATATCAGTCCAGTCCTCACATGGGGCATCGGCCTGTGAATTTAGGTGTGTTACCCACAAGTAATTTACCTGCCATGGATTTGTGTATGGGTGCTAACAGTCAATCTGGCATAAATATTCAAAATGTCATGCAATGTATGTCAAACATGGCTTCATTGAACCAATCCAGATTTGGCACCAGTAGTAGTAGCATGCCGCCTAACCCAGCTCCACATCAAGCTACACCATCAGATGTAGTTTCTTTATCTGATGATGATGACTAA 4668 0.4197 MTRSTLSKKMASSSRNRESERNLKRKEAPPCVGVRTKSTKKQKKITTQVATPLVLRRSERTRNLSSSMSQMKKPKQQENEDDEDEERDVEAEAVQIKRKMNARIYKNMFRNPKRDCNPESKKIGKSIREGGNSSGGKIDEDFEGNPVDHKEVSKDNKGEEVSKDVIIPSEEGQGEEVSKGGKIPSEDKKAEEVFKDCILPSEEGKAKVLRAESRLSEPMKDQLENSVTLASWITSNATAHETSGETGRVQSDCREEDTIEMQESRNSMLNKSLIKNCVELDKGENSISSKRRETMVDMHSDVSATLVNDDNDNLIADASPSTNTVGTSESSSKRIRPTSLSDLQRNQTKLINNVDQSSSMSEGEKLYPGYKGGKSGDPVERPQSSNDEVRKQQRSLHLLLKPGIAMLCEVLRFPVPDFPSPCMLDSPLTFCLEGEIGATVKLLLSDHKDTVKRMVDNCLEYIMNNRQICTEPVSIFQAFQLSLCWTAADLLKHKLDREDSFMLAKGHLNFHCKIEEVYEIHRMMRKLKKDFLYHTGNYNVSSSPKASESSCRVYSNTGVAPKVEMTCTDISRSSEVKQLLLRQEEAKKKLEADIERKKADFEIRCRIELAAYLAFSRNDVTRTEKVKVFNSEYSKRIGELKRQHETQLKDLEARQLEERRKFQESSPPHESCSGSGRDIATLVPFSSNGETCDGKISDTPSGEVALALHKSHCSNGPDEISTSSLGKPDGTMLSKPVYDCSVETRLNGPKNMVSLNSQSTEEHIPSAIITSSSNCDNTAQIHGANDGSGSNNVCTLDSPLSVERIASLNSKPPQEHAHGVNAKCMPNCENSAQIYVVGDDPVSNTANIAATLNLPLTDERIADGTISLLDMEVGAEMPATVSFTDCPENVTAMNPLLPIEQMSGGLVKVSVSDRDLSRSCGTASPGNSNDGNHITLLNQLSSEEPHLDAVPLRISAGQIHEVPETSHEVVTVSVVDKEAPMGNPGAVNCTDHPENVTPLNSSAMCQISDGDLSSRPSWASSSCVGPATVSLLNPPSLEQQIPDKDLFKIPDEQIRMMVLETNHDSLIEPLEKMHPLSSVESSPDQDTDREMLSSLLSSPVDIVPANQSNHVSLVTEPPEEVQQQSPSANFLSSNWDLSDMPFAGTEHQPTNEDALSSPIPEISTEVPNQAVEQPASYLELDSPMPGGVRTQSSDTRNFSTPSEINQHSIQSATHPTSMIVPPLCRDPLVNEVERISKLTDLNMKNHEDMQLTTAIFFLSEQKLQLKSDFEKEFEELHRKYEIKIKEIDVGFQQTKKKLDTDHKTVLLNKILAEAFSLKYMEVRASGASGVQQGASSAQQSWQLSRPQVTTRPSLVFGQSSCAPPAASLLSSYITTSSQNALPPTIQATPNTSGIFSSFSPRLPNINSISSPSNPHAGGEMRATAPHLQPYRPATAVPSPSLSTVPHGMPIQPAPGNIPVTSTFSHWPATYQSSPHMGHRPVNLGVLPTSNLPAMDLCMGANSQSGINIQNVMQCMSNMASLNQSRFGTSSSSMPPNPAPHQATPSDVVSLSDDDD 1555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0387 1555 MobiDBLite consensus disorder prediction 311 392 - -
Lal1g0387 1555 MobiDBLite consensus disorder prediction 1523 1548 - -
Lal1g0387 1555 MobiDBLite consensus disorder prediction 43 73 - -
Lal1g0387 1555 PANTHER - 5 414 - -
Lal1g0387 1555 PANTHER - 449 670 - -
Lal1g0387 1555 PANTHER - 687 1021 - -
Lal1g0387 1555 PANTHER - 1091 1554 - -
Lal1g0387 1555 MobiDBLite consensus disorder prediction 658 680 - -
Lal1g0387 1555 MobiDBLite consensus disorder prediction 1179 1201 - -
Lal1g0387 1555 Coils Coil 79 99 - -
Lal1g0387 1555 MobiDBLite consensus disorder prediction 13 31 - -
Lal1g0387 1555 MobiDBLite consensus disorder prediction 1072 1091 - -
Lal1g0387 1555 MobiDBLite consensus disorder prediction 1186 1201 - -
Lal1g0387 1555 Gene3D - 1225 1318 - -
Lal1g0387 1555 PANTHER HELICASE PROTEIN MOM1 687 1021 IPR039322 GO:0031507
Lal1g0387 1555 PANTHER HELICASE PROTEIN MOM1 5 414 IPR039322 GO:0031507
Lal1g0387 1555 PANTHER HELICASE PROTEIN MOM1 1091 1554 IPR039322 GO:0031507
Lal1g0387 1555 PANTHER HELICASE PROTEIN MOM1 449 670 IPR039322 GO:0031507
Lal1g0387 1555 MobiDBLite consensus disorder prediction 141 186 - -
Lal1g0387 1555 Coils Coil 573 600 - -
Lal1g0387 1555 MobiDBLite consensus disorder prediction 1523 1555 - -
Lal1g0387 1555 MobiDBLite consensus disorder prediction 1 91 - -
Lal1g0387 1555 MobiDBLite consensus disorder prediction 311 363 - -
Lal1g0387 1555 Coils Coil 634 661 - -
Lal1g0387 1555 MobiDBLite consensus disorder prediction 107 186 - -
Lal1g0387 1555 MobiDBLite consensus disorder prediction 108 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0387 Lal-Chr1 2362417 2373026 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0387 - - lang:109325319 2473.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0387 1 2362417 2373026 Lal1g0387 1 2362417 2373026 ECH
Lal1g0387 1 2362417 2373026 Lal9g0280 9 1752328 1769850 LSH
Lal25g0191 25 1272661 1287893 Lal1g0387 1 2362417 2373026 PCT
Lal1g0387 1 2362417 2373026 Lal25g0191 25 1272661 1287893 PCT