Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0375 ATGGCTTCCTCCAAAAAAGAGAAGAAAATTATAGAGGACAAGAAGAAGGAACAGAAAATCAAAGAGAAGAAGGAGGTGAAAAACAAAGAGGAGAAGCTTAATCTCAGCAATGGAAATTCGAAACAGCACAAAGATAAATCACTGAACACTCTGTGTTCCAGCGACCTAGAAAAACAAGATAACAACACCACTGTTATTAATGGACCAACCAGTGGCACAAAACCGAAACGAAAGCGAGAGGAACATGAACATGATGAAGAAGACGTTTCCAAAACGCATGCGTTTCCAATTAATCGTATCAGGACGGTAATTAAAGGAGAAGATCCTAATTCACGTGTTTCTCATGAAGCGATAATTGCTATCAACAAAGCTACAGAGAAGTTTCTAGAACAACTTACGCTTGACGCTTATACTCGTTGTGTTCAGGAGCGTAAGAAATCTCTGAGTTACATGCACCTAGCACATGTTGTTAGTAAGGAGAGGAGATATGATTTTCTTTCTGATTTTGTTCCTGGGAAAGTGAAAGCCGAGGATGCATTAAAAGAGAGATATTCAGGAGGGAGTGGAGGAGGTTAG 576 0.3976 MASSKKEKKIIEDKKKEQKIKEKKEVKNKEEKLNLSNGNSKQHKDKSLNTLCSSDLEKQDNNTTVINGPTSGTKPKRKREEHEHDEEDVSKTHAFPINRIRTVIKGEDPNSRVSHEAIIAINKATEKFLEQLTLDAYTRCVQERKKSLSYMHLAHVVSKERRYDFLSDFVPGKVKAEDALKERYSGGSGGG 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0375 191 MobiDBLite consensus disorder prediction 40 71 - -
Lal1g0375 191 SUPERFAMILY Histone-fold 57 166 IPR009072 GO:0046982
Lal1g0375 191 MobiDBLite consensus disorder prediction 1 94 - -
Lal1g0375 191 Gene3D Histone, subunit A 79 172 IPR009072 GO:0046982
Lal1g0375 191 MobiDBLite consensus disorder prediction 73 94 - -
Lal1g0375 191 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 95 157 IPR003958 -
Lal1g0375 191 MobiDBLite consensus disorder prediction 1 39 - -
Lal1g0375 191 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 8 185 - -
Lal1g0375 191 Coils Coil 12 36 - -
Lal1g0375 191 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR AND ARCHAEAL HISTONE FAMILY PROTEIN, EXPRESSED 8 185 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0375 67 156 CCAAT-HAP5 Transcription Factor Family AT1G07980 34.783 3.58e-13 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lal1g0375 CBFD_NFYB_HMF 3.4e-13 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0375 - K03506 lja:Lj3g3v3086110.3 166.777