Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0365 ATGATTGATTCCCTTATAAAAGCGCAAGCTTTGGCTTCCAAACAAACCCCACCCCCACTTCACTTTTCTTTCCACCTTTGTGACCCTAAAATACAAAAAGAAGAAGCCAAACAGAAAGGAACAAAAAAGGTGAGAAATATGAAGAGTTGTGACACAAACAATAACCCTGCTTCTTCTGCCCCACTTTCTCAGTCTCCTACTAATTCATCTTCTTCTTTTCCAATTACTCCTCAAGTTGTTATGATCCCTTGTGCTGCCTGCAAAATTTTGAGAAGAAGATGTGATGAGAAATGTGTGTTGGCACCTTATTTCCCTCCCACTCAACCTGCCAAGTTTACCATTGCCCACCGTGTCTTTGGTGCTAGCAACATCATCAAGCTCTTACAGGAACTTCCAGAGTCTGAAAGAGCTGATGCAGTGAGCAGCATGGTTTATGAGGCTAGTGCAAGAATAAGAGACCCTGTTTATGGTTGTGCACGTGTAATTTGGCACCTCCAAAATCAGATTAATGAACTTCAAGCACAATTAGCTAAGGCACAAGCTGAAGTTGCAAACATGCAAGCCCATCAAGCAAATCTTATGGCACTAATATGCATGGATGTGGCACAAAGTCCACATGAATTATCACCACAACAATCACTGGATAATTTCATTTCAAGTCCTCCACATAGTAGTGGCTATCAAAGCAGTACAAATTTCTATGAGGATAACACTACTGGCCTGAATTTGTTGTGGGACCAGCCTCTTTGGGCTTGA 756 0.418 MIDSLIKAQALASKQTPPPLHFSFHLCDPKIQKEEAKQKGTKKVRNMKSCDTNNNPASSAPLSQSPTNSSSSFPITPQVVMIPCAACKILRRRCDEKCVLAPYFPPTQPAKFTIAHRVFGASNIIKLLQELPESERADAVSSMVYEASARIRDPVYGCARVIWHLQNQINELQAQLAKAQAEVANMQAHQANLMALICMDVAQSPHELSPQQSLDNFISSPPHSSGYQSSTNFYEDNTTGLNLLWDQPLWA 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0365 251 Pfam Lateral organ boundaries (LOB) domain 83 180 IPR004883 -
Lal1g0365 251 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 71 247 - -
Lal1g0365 251 MobiDBLite consensus disorder prediction 47 72 - -
Lal1g0365 251 Coils Coil 162 189 - -
Lal1g0365 251 MobiDBLite consensus disorder prediction 35 72 - -
Lal1g0365 251 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 71 247 - -
Lal1g0365 251 ProSiteProfiles LOB domain profile. 82 183 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0365 Lal-Chr1 2212661 2216475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0365 78 250 AS2 family AT1G07900 62.857 1.18e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal1g0365 LOB 1e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0365 - - gmx:100789504 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0365 1 2212661 2216475 Lal1g0365 1 2212661 2216475 ECH
Lal1g0365 1 2212661 2216475 Lal2g0270 2 1572536 1573600 LSH
Lal25g0169 25 1085787 1086949 Lal1g0365 1 2212661 2216475 PCT
Lal10g1242 10 18701158 18702940 Lal1g0365 1 2212661 2216475 PCT
Lal8g0133 8 924099 925621 Lal1g0365 1 2212661 2216475 PCT
Lal1g0365 1 2212661 2216475 Lal25g0169 25 1085787 1086949 PCT
Lal1g0365 1 2212661 2216475 Lal10g1242 10 18701158 18702940 PCT
Lal1g0365 1 2212661 2216475 Lal8g0133 8 924099 925621 PCT