Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0362 ATGGCCGGCGTGAATACGAACGGTGATGTAGGAGATTTTCCGGCGATTCCAACGCACGGAGGACAGTATATTCAGTACAATATATTCGGTAATCCGTTCGAGGTTACCACCAAGTATCGCCCTCCGATCATGCCTGTTGGTCGTGGTGCCTACGGAATCGTTTGTTCCTTGTTGAATATGGAAACTAATGAGTTGGTGGCAATTAAGAAGATAGCAAATGCTTTTGATAATTACATGGATGCTAAGCGTACCCTCCGTGAGATTAAGCTTCTTAAGCATTTGGATCATGAAAATATAATTGCTTTAAGAGATGTTATTCCTCCACCTTTGCGAAGAGAGTTTAATGATGTCTACATAGTCACGGAACTCATGGATACCGATCTTCACCACATCATTCGCTCCAATCAAAATCTGTCAGAGGAACACTGTCAGTACTTCTTGTATCAGGTTCTTCGTGGATTGAAGTATATACATTCTGCAAACATAATCCATAGAGATTTGAAACCTAGCAACCTGTTGCTGAATGCAAATTGTGACTTGAAGATCATTGATTTTGGTCTCGCACGGCCAGCTTTGGAGAGTGACTTCATGACAGAATATGTTGTCACAAGATGGTACAGGGCTCCCGAATTGTTGTTGAACTCCTCAGATTACACTTCTGCCATAGATGTGTGGTCTGTTGGTTGCATCTTTATGGAGCTTATGAATAAAAAGCCTCTGCTTCCGGGAAAAGATCATGTCCATCAGATGCGCCTATTGACAGAGCTTCTTGGTACTCCAACTGAGGCTGACCTGGGGTTAGTGAGAAATGAGGATGTGAGAAGATATATCCGACAACTAACTCAATATCCTCGCCAACCTTTAGCCAAGGTCTTCCCCCATGTTCACCCCTTAGCCATGGATCTTGTTGATAAAATGTTGACACTTGATCCAACTAAAAGAATTACAGTTGAAGAAGCTCTAGCCCATCCATACCTTGCAAAACTGCATGATGAAGGTGATGAACCAGTCAGCATGGAGCCATTCTCATTTGAATTTGAGCACCAACAATTGGACGAAGAGCAAATAAAAGAGCTGATTTACAAGGAAGCATTGGCACTCAATCCTGAGTATGCTTAA 1119 0.4245 MAGVNTNGDVGDFPAIPTHGGQYIQYNIFGNPFEVTTKYRPPIMPVGRGAYGIVCSLLNMETNELVAIKKIANAFDNYMDAKRTLREIKLLKHLDHENIIALRDVIPPPLRREFNDVYIVTELMDTDLHHIIRSNQNLSEEHCQYFLYQVLRGLKYIHSANIIHRDLKPSNLLLNANCDLKIIDFGLARPALESDFMTEYVVTRWYRAPELLLNSSDYTSAIDVWSVGCIFMELMNKKPLLPGKDHVHQMRLLTELLGTPTEADLGLVRNEDVRRYIRQLTQYPRQPLAKVFPHVHPLAMDLVDKMLTLDPTKRITVEEALAHPYLAKLHDEGDEPVSMEPFSFEFEHQQLDEEQIKELIYKEALALNPEYA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0362 372 ProSiteProfiles Protein kinase domain profile. 40 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0362 372 ProSitePatterns MAP kinase signature. 75 178 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lal1g0362 372 Pfam Protein kinase domain 45 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0362 372 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 371 - -
Lal1g0362 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Lal1g0362 372 Gene3D Phosphorylase Kinase; domain 1 23 363 - -
Lal1g0362 372 SMART serkin_6 40 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0362 372 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 371 - -
Lal1g0362 372 SUPERFAMILY Protein kinase-like (PK-like) 45 332 IPR011009 -
Lal1g0362 372 Gene3D Transferase(Phosphotransferase) domain 1 124 353 - -
Lal1g0362 372 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0362 Lal-Chr1 2173220 2176879 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0362 8 372 MAP Kinase Gene Family AT3G45640 81.096 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lal1g0362 Pkinase 9.7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0362 K20536 - gmx:100801339 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0362 1 2173220 2176879 Lal1g0362 1 2173220 2176879 ECH
Lal1g0362 1 2173220 2176879 Lal2g0266 2 1550815 1559261 LSH