Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0361 ATGGAACGGTTAATAGATAAGTTACCATCAATGGATCTGATGCGTTCAGAGAAGATGACATTCGTTCAACTCATCATTCCTGTTGAGTCCGCTCACCGAGCCATATCCTATTTGGGCGAACTCGGTCTTCTCCAATTCCGTGACTTAAATGACGAAAAAAGCCCCTTTCAGAGAACATTTGTTACTCAGGTAAAGCGATGTGCAGAAATGTCAAGAAAACTGCGATTCTTCAAGGATCAAATCAATAAAGCCAGTCTGATGACTTTTCCTCCTGTATTGCAACCCGATATTTTCTTCGAGGATTTAGAGTTGGTTGTCTGCACTTTTCCCAGTTTAGGAATTTTAATTCTTGAATCTGACATTATAAATTCTATTGGATTTCTCTTAAACCAGATACAATTGGATGAGCATGAACACGAGCTAATTGAAATGAACTCTAATAGTGAGAAACTTCGGCAATCATATAATGAATTACTGGAGTTCAAGATTGTATTGCAAAAGGCATGTGGTTTTCTTGTTTCAAATCATGGCCACACTGTGTTGGAAGAGAGAGAACTAGAGGAGAATGTTTACTCAAATGGAGGCTATGTTGAGACACCATTTTTGTTTGAACAGGAAATGAGACCTGGACCGTCAAATCAATCTGGTTTAAGATTTATCTGCGGGATAATTTGTAAATCCAAAGTTGTAAGGTTTGAAAGGATGTTATTTCGTGCTACAAGAGGCAATATGCTTTTCAATCAGACACCAGCTGATGAACTAATCACCGATCCAATTTCTGGGGAGATGATTGAGAAAACAGTGTTTGTTGTGTTTTTCTCTGGAGAGCAGGCAAGAACAAAGATTCTGAAAATTTGTGAGGCATTTGGTGCAAATTGTTACCCTGTTCCTGAAGATATAAGTAAACAAAGGCAAATAACTAGGGAGGTTTCTTCACGTCTTGCTGACTTAGAGGCAACTTTGGATGCTGGGATTAGGCATTGGAATAAGGTTCTAGCTTCTTTAGGAGGTCATTTACCAAAATGGATGGACATGGTAAGAAGAGAGAAAGCAGTGTATGATACACTGAACATGTTAAATGTTGATGTCACAAAAAAATGTCTCGTTGGAGAGGGATGGTGCCCTATATTTGCAAAAACACAGATTCAGGAGACATTGCAGCGTGCAACATTTGACAGCAATTCTCAAGTTGGCATAATCTTTCATTCAATGGATGCAGTGGGATCACCCCCAACATATTTTAGGACCAATGGTTTCACATATCCATATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATATCAAGAAGCAAATCCTGCAGTTTACACTACTATTATATTCCCATTTCTTTTTGCGGTAATGTTTGGGGACTGGGGTCATGGAATTTGCCTGTTGCTGGGAGCATTATTTCTTATAGCACGTCAAAACAAGCTCAGCACTCAGAAACTTGGAAGCTTTATGGAGATGCTATTTGGCGGGCGCTATGTGCTTCTTTTGATGTCACTATTTTCAATCTATTGTGGGTTAATATACAATGAATTCTTCTCTGTTCCTTTCCACATATTTGGTGCGTCTGCTTACAAATGCAGAGATAGTTCATGCAGGGATGCACATACTACTGGCTTAGTGAAATTCCAAGAACCATACCCATTTGGTGTGGATCCCAGTTGGCGTGGAAGTCGTTCAGAATTGCCTTTTCTGAACTCTCTCAAGATGAAGATGTCGATTTTGTTTGGTGTGGTGCATATGAACTTGGGAATTATGTTAAGTTATTTTAATGCTCATTTTTTTGGTAACTCGGTGGATATAAGGTACCAGTTTGTGCCACAGGTGATTTTCCTTAATAGCCTATTTGGGTATCTTTCCCTTCTCATTATTGTTAAGTGGTGCACTGGATCTCAGGCGGACCTTTATCATGTAATGATTTACATGTTTTTAAGCCCCTTCGATAATCTTGGTGAGAATCAGTTGTTGTGGGGCCAAAGACCACTTCAAGTTGTGTTATTGCTTTTGGCTGTAATTGCGATTCCATGGATGCTCTTTCCAAAACCTTTTATACTAAAGAAGCTTCATAATGAGAGATTTCAAGGACGCAATTATGGTATGCTAAATATTTCTGAGATGGATCTTGAGGCCGAACCAGATTCTGCCAGGCAACATCACGAGGAGTTCAATTTCAGTGAGGTCTTTGTTCACCAAATGATTCACGCCATTGAGTTTGTTCTAGGCTCAGTTTCAAATACAGCATCATATCTTCGTCTTTGGGCATTAAGCTTGGCTCACTCAGAACTTTCTACTGTTTTTTATGAGAAAGTCCTGCTTCTTGCTTGGGGGTATGATAATTTTGCCATTCGATTGGTGGGGCTAGTTGTTTTTGCCTTTGCAACTGCCTTTATACTACTTATGATGGAAACTCTTAGTGCTTTTCTTCACGCCCTGCGACTTCACTGGGTAGAATTTCAAAATAAATTCTACCATGGTGATGGCTATAAGTTCAGACCTTTTTCCTTTGCCCTCCTCACAGAGGATGAAGATTGA 2541 0.3951 MERLIDKLPSMDLMRSEKMTFVQLIIPVESAHRAISYLGELGLLQFRDLNDEKSPFQRTFVTQVKRCAEMSRKLRFFKDQINKASLMTFPPVLQPDIFFEDLELVVCTFPSLGILILESDIINSIGFLLNQIQLDEHEHELIEMNSNSEKLRQSYNELLEFKIVLQKACGFLVSNHGHTVLEERELEENVYSNGGYVETPFLFEQEMRPGPSNQSGLRFICGIICKSKVVRFERMLFRATRGNMLFNQTPADELITDPISGEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLADLEATLDAGIRHWNKVLASLGGHLPKWMDMVRREKAVYDTLNMLNVDVTKKCLVGEGWCPIFAKTQIQETLQRATFDSNSQVGIIFHSMDAVGSPPTYFRTNGFTYPYQEIVDAYGVARYQEANPAVYTTIIFPFLFAVMFGDWGHGICLLLGALFLIARQNKLSTQKLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPFHIFGASAYKCRDSSCRDAHTTGLVKFQEPYPFGVDPSWRGSRSELPFLNSLKMKMSILFGVVHMNLGIMLSYFNAHFFGNSVDIRYQFVPQVIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPFDNLGENQLLWGQRPLQVVLLLLAVIAIPWMLFPKPFILKKLHNERFQGRNYGMLNISEMDLEAEPDSARQHHEEFNFSEVFVHQMIHAIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNFAIRLVGLVVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFALLTEDED 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0361 846 PIRSF ATP6V0A1 9 846 IPR026028 GO:0000220|GO:0046961
Lal1g0361 846 Pfam V-type ATPase 116kDa subunit family 37 838 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lal1g0361 846 PANTHER VACUOLAR PROTON ATPASE A1 131 846 - -
Lal1g0361 846 PANTHER VACUOLAR PROTON ATPASE A1 6 106 - -
Lal1g0361 846 Coils Coil 134 154 - -
Lal1g0361 846 PANTHER VACUOLAR PROTON ATPASES 131 846 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lal1g0361 846 PANTHER VACUOLAR PROTON ATPASES 6 106 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0361 Lal-Chr1 2172034 2185964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0361 1 841 Primary Pumps ATPases(2) AT2G28520 75.976 0.0 1305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0361 K02154 - gmx:100800799 1458.35