Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0357 ATGGAAAATGAAAATAGAGATGAAAATGAAAAAGTGAAAGGAATTCCCATTCACGAAGGGAAATTCGTGCGTTACAATGTACTCGGCAACTTCTTCGACGTTTTTCCTAAATATGTTCCTCCTCTCCAACCTATCGGACGCGGCTCATACGGCATCGTTTGCTGTGCAAGGAATTCGGAGACAAAAGAAAGAGTTGCAATAAAAAAGATTGGAAATGCCTTTGACAACAGGATTGATGCTAAGAGAACACTTAGAGAAATTAAACTCCTTTGTCACATGGACCATGATAATGTAATTAAAATCAAGGACATAATGCAGCCGCCGGATAACAACGGAAATTTCAATGATGTGTACATTGTATATGAACTCATGGATACTGACTTGCATCAGATTATACAGTCTAATCAGGTTCTTACTGATGAGCATTGTCAGATGGTCATGAGTTCAAATCCTGAAAACAACTCATTTGCTTGCGAAGGTAAGTATTTTCTATATCAACTATTGAGAGGGTTGAAGTACATTCACTCTGCAAATGTTCTTCACCGAGATCTAAAACCAAGCAATTTACTACTCAATGCAAATTGTGATCTCAAAATATGTGACTTTGGGCTTGCCAGAACAACATCTGAGACAGACTTTATGACAGAATATGTCGTGACTCGTTGGTACAGAGCCCCTGAATTGCTATTGAATTGTTCAGAATATACTGCAGCTATTGACATATGGTCAGTTGGTTGCATTTTGATGGAGATAATTAGAAGGGAACCTTTATTTCCTGGTAAAGATTATGTTCAACAGTTGGCACTCATAACTGAGTTGCTAGGTTCACCAAACGATTCAGACCTTGGATTCCTCAGAAGCGATAATGCAAAGAAATATGTTAAGCAGCTTCCACATGTTGAAAAGCAGCCATTTGCACAGAGGTTTCCGGATATGTCCCCATTAGCCATTGATCTTGCTGAGAAAATGTTGGTTTTCAATCCCTCCAAACGCATGTCTGTCGAGGAAGCACTGAATCACCCATATTTGTCAAGCCTTCATGAGATCAACGAGGAGCCCACTTGTCCAACTCCTTTCTTCTTCGATTTTGAACAAACAACCGTGAATGAAGAAGATATAAAAGAGCTTATATGGAAGGAGTCTCTGAACTTCAGCCTGGTTGGAACGCTGGAGCAGCCTCAGTCAAATTAA 1191 0.3963 MENENRDENEKVKGIPIHEGKFVRYNVLGNFFDVFPKYVPPLQPIGRGSYGIVCCARNSETKERVAIKKIGNAFDNRIDAKRTLREIKLLCHMDHDNVIKIKDIMQPPDNNGNFNDVYIVYELMDTDLHQIIQSNQVLTDEHCQMVMSSNPENNSFACEGKYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILMEIIRREPLFPGKDYVQQLALITELLGSPNDSDLGFLRSDNAKKYVKQLPHVEKQPFAQRFPDMSPLAIDLAEKMLVFNPSKRMSVEEALNHPYLSSLHEINEEPTCPTPFFFDFEQTTVNEEDIKELIWKESLNFSLVGTLEQPQSN 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0357 396 ProSitePatterns Protein kinases ATP-binding region signature. 45 69 IPR017441 GO:0005524
Lal1g0357 396 CDD STKc_TEY_MAPK 32 385 - -
Lal1g0357 396 SMART serkin_6 39 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0357 396 Gene3D Phosphorylase Kinase; domain 1 42 123 - -
Lal1g0357 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Lal1g0357 396 Gene3D Transferase(Phosphotransferase) domain 1 124 359 - -
Lal1g0357 396 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 17 385 - -
Lal1g0357 396 Pfam Protein kinase domain 43 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0357 396 SUPERFAMILY Protein kinase-like (PK-like) 42 349 IPR011009 -
Lal1g0357 396 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 17 385 - -
Lal1g0357 396 ProSiteProfiles Protein kinase domain profile. 39 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0357 Lal-Chr1 2144234 2148638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0357 14 384 MAP Kinase Gene Family AT1G07880 74.933 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lal1g0357 Pkinase 5.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0357 K04371 - gmx:100802929 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0357 1 2144234 2148638 Lal1g0357 1 2144234 2148638 ECH
Lal1g0357 1 2144234 2148638 Lal2g0263 2 1527315 1530471 LSH