Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0350 ATGTGGGATTGCAGAGAAGTTGAGTTGTTCATTTGTGCCTTATCAATCTTTCCCTTGTTATGTTTTTCTGCCAACTTTGTTCCTATAGACAATTACCTTATAGACTGTGGAGCACTTCACAATACCTCAGTTGATATACGCAATTTCGCAGCTGATAACTTCTTTAACAATTTCCTTTCCACCCAACAAAACATTCTTGCTAGCACCTCCTTAAAATCAATTAGTGATGATTCACCTCTCTATCAAACTGCAAGAGTTTTCACTGAATCCTCAAAGTACACTTTTCCAATTAATCATAAGGGCAGACATTGGATCCGCCTTTATTTCTATCCATTTTCATATCAGAATTACTATTTAAGTACTGCAAACTTTGCTGTTACCACCCAAAGTAACATCCTTCTCACTAACTTCAGTGTGCAGAAAAATCCTATTATGAAGGAGTACTTAGTAAATGTCAACTCAGACACCCTTGTGATCTCCTTTACCCCTTCCGATAATTCCATTGCTTTCGTGAATGCAATTGAAGTTGTTTCAGTCCCTGATGACCTGATTGTTGATGATGCTTTCACCTTAAATCCACTAGCAAGCTACTCCGGGTTGTTGACACAGGCATTGGAAACAGTTTTCAGGGTTAACATGGGCGGTCCAACTGTGTCACCTGCCAATGACACCCTTCATCGAACTTGGATTCCTGATCAAAGCTTCCTCATACAACCTAACCTTGCGTCTAATGTTTCAAATATCGGTGCTGTTAAATACGTAAGCGGGGGGCCAACAGAGAACACTGCTCCACCAACTATCTATGGTACACTGACAGAGATGAACTCAAACTATGATCCGCGTAGTAATTTCAATGTTACCTGGCAGTTTGATGTGGAACCTGGATTTCAGTACCTTCTTAGAATTCACTTATGTGATATAGTCAGTAAAGGTCTTAATGAACTCTACTTCAATGTATACATTGATTCCTGGTTGGCTGCAAAGGATCTTGATCTCAGTACAATAAATAATAATGCTTTAGCTACTCCATATTATAAGGATTTGGTTTCAGCCCCAACCACCAGCAACAAAATTCTTGTGAGTATTGGCCCTTCTTCTCTAAATAGCGATTATCCAAATGCCATTTTGAATGGGCTTGAGATCATGAAAATCAACAACTCTATGAGCAGTCTCAGTGCAGCAGCAGCTGTCTCTCTGTCTAGTACTTCTGGTTCAAATTCTAAGAAAGTTGGCATCATAGTTGGGGTGAGTGTTGGTGCATTTATTGCAATGGTCTTGGTTGGATTTTTCTTTGTACTACACAGTAAAAGAAGACGGTTGGTGCGACAAGGGCATTCAAAGACATGGGTTCCATTATCTATCAATGATGGAACTTCTCACACCATGGGAAGTAAATATTCTAGTGGTACAACTGCAAGTGCTGCTTCAAACTTCGGGTATCGTATCCCTTTTGCAGCTGTTCAGGAGGCTACAAACAATTTTGATGAGAGTTGGGTTATTGGCGTAGGTGGTTTTGGTAAAGTGTATAAGGGAGAATTAAGTGATGGCACTAGAGTCGCAGTTAAGAGGGGTAATCCTCGGTCCCAGCAAGGGCTTGCTGAATTCCGAACCGAGATTGAAATGCTATCTCAGTTCCGCCATCGCCATCTAGTTTCATTGATTGGTTATTGTGATGAAAAGAATGAAATGATCTTGATATATGAATATATGGAGAAGGGGACACTCAAGAGTCATCTGTATGGTTCAGGTCTTCCAAACTTAAGTTGGAAGGAGAGACTTGATATATGCATTGGAGCAGCGAGAGGACTTCATTATCTTCATACTGGTTATGCTAAAGCAGTTATTCACCGTGATGTGAAGTCTGCAAATATCTTGCTTGATGAGAACCTCATGGTCAAAGTTGCTGATTTTGGGCTATCAAAGACCGGGCCTGAAATTGATCAGACACATGTAAGCACAGCTGTTAAAGGGAGTTTTGGGTACCTTGATCCTGAGTATTTCAGGAGGCAACAATTAACAGAAAAGTCCGATGTGTATTCATTTGGGGTAGTTCTGTTTGAGGTTATTTGTGCTAGACCTGTTATAGATCCATCACTTCCAAGAGAAATGGTAAACTTGGCAGAATGGGCAATGAAGTGGCAGAAAAAAGGTCAATTGGGTCAAATTATAGACCCAACACTTGCAGGGAAAATCAGACCAGACTCTCTTCGGAAGTTTGGAGAAACTGCTGAAAAATGCTTGGCTGATTATGGTGTGGATAGACCTTCTATGGGAGATGTGTTGTGGAATTTGGAGTATGCTCTACAACTTCAAGAGGCTCTTGTTCAAGGTGATCCTGCAGAAAACAGTACCAATATGATTGGTGAACTCTCTCCGCAGATCAACGATTTCAACCACGAAGCAAGTGTTACTGGTGCACAATTTGAAGCTTCAAGCCTAAATGATCTATCTGGTGTTTCTATGAGTAGGGTATTCTCTCAGTTGGTTAAGTCTGAGGGGAGGTGA 2505 0.408 MWDCREVELFICALSIFPLLCFSANFVPIDNYLIDCGALHNTSVDIRNFAADNFFNNFLSTQQNILASTSLKSISDDSPLYQTARVFTESSKYTFPINHKGRHWIRLYFYPFSYQNYYLSTANFAVTTQSNILLTNFSVQKNPIMKEYLVNVNSDTLVISFTPSDNSIAFVNAIEVVSVPDDLIVDDAFTLNPLASYSGLLTQALETVFRVNMGGPTVSPANDTLHRTWIPDQSFLIQPNLASNVSNIGAVKYVSGGPTENTAPPTIYGTLTEMNSNYDPRSNFNVTWQFDVEPGFQYLLRIHLCDIVSKGLNELYFNVYIDSWLAAKDLDLSTINNNALATPYYKDLVSAPTTSNKILVSIGPSSLNSDYPNAILNGLEIMKINNSMSSLSAAAAVSLSSTSGSNSKKVGIIVGVSVGAFIAMVLVGFFFVLHSKRRRLVRQGHSKTWVPLSINDGTSHTMGSKYSSGTTASAASNFGYRIPFAAVQEATNNFDESWVIGVGGFGKVYKGELSDGTRVAVKRGNPRSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMEKGTLKSHLYGSGLPNLSWKERLDICIGAARGLHYLHTGYAKAVIHRDVKSANILLDENLMVKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVICARPVIDPSLPREMVNLAEWAMKWQKKGQLGQIIDPTLAGKIRPDSLRKFGETAEKCLADYGVDRPSMGDVLWNLEYALQLQEALVQGDPAENSTNMIGELSPQINDFNHEASVTGAQFEASSLNDLSGVSMSRVFSQLVKSEGR 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0350 834 Pfam Protein tyrosine and serine/threonine kinase 499 691 IPR001245 GO:0004672|GO:0006468
Lal1g0350 834 SMART serkin_6 494 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0350 834 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Lal1g0350 834 Gene3D Transferase(Phosphotransferase) domain 1 570 785 - -
Lal1g0350 834 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 19 825 - -
Lal1g0350 834 SUPERFAMILY Protein kinase-like (PK-like) 474 765 IPR011009 -
Lal1g0350 834 ProSiteProfiles Protein kinase domain profile. 494 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0350 834 Pfam Malectin-like domain 34 384 IPR024788 -
Lal1g0350 834 CDD STKc_IRAK 500 765 - -
Lal1g0350 834 ProSitePatterns Protein kinases ATP-binding region signature. 500 522 IPR017441 GO:0005524
Lal1g0350 834 Gene3D Phosphorylase Kinase; domain 1 456 569 - -
Lal1g0350 834 PANTHER OS07G0166700 PROTEIN 19 825 IPR045272 GO:0004714|GO:0006468
Lal1g0350 834 Gene3D - 203 386 - -
Lal1g0350 834 Gene3D - 31 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0350 Lal-Chr1 2079456 2087108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0350 5 834 Receptor kinase-like Gene Family AT3G46290 65.871 0.0 1108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lal1g0350 Malectin_like 5.4e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0350 - - gmx:100806488 1389.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0350 1 2079456 2087108 Lal1g0350 1 2079456 2087108 ECH
Lal8g0122 8 830166 834387 Lal1g0350 1 2079456 2087108 PCT
Lal1g0350 1 2079456 2087108 Lal8g0122 8 830166 834387 PCT