Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0324 ATGAATATGATAAATAGAAAAACCATCAAAACCAAAGTTGAAATTTTCACTCCTTCGACAATGGAACTCTTATTGATGCCTTCACACTCACACCATGATGAACACAACTCCATGGAAGGAAAATGTACGGAAAAGGTTCATGTTGCTGTTGGAAAATCGGTGCAGAAAGCCACAACTTTACTTCAATGGAGTTTAACCCACTTTAACAACACACATATTTGCTTGATTCATGTTTATCAACCTTCTCCTCTTATTCCCACCCTTTTGGGGAAGTTCCCAGCATCCCAAGCTAATCCTGGAGTGGTGTCTGCTTTTAGAAAAGAGGAAAAAGAACAGATCATGAAGCTCTTGGACAAGTACTTGAGCATTTGCCTTGCAGCTAAGGTTAAGGCAAGCATTGTGGTAGTTGAAGCTGATCAAGTCCAGAAAGGGATTGTTGATTTGGTTAATGGGCATAATATTAGGAAGCTTGTAATTGGAGCAATACCAGAGAATTTCATGAACGTTAAAAGGAATTCCAGTAAAGCAACCTATGCTGTCAAAAATACTCCCTCATTTTGTGAAATATGGTTTATCTATAAAGGTAAACATGTCTGGACAAGAGCGGCTTGTGAAAGCCCGCATTCATTATCTTCATGTGCTCAACCTGAGGTTACAACCGCAGAAAGCTTGAGTAGTAGATCTGTTCAACATGGTATGAATGAATTATCTCATTCAGAACGTCTTCAATCACATTCTGCAAGGACTACTATATGTAATGGAATTGGAAGTTTGATTCGGAGTGAAACCATTGAAACAGAAGCCACTTTTCCATCCAAATTATCCAGTTCTAGCAGTCATTGTTCTCCCCGAAGTTCTGCCGGGAGGTCTGTAGATAGTCATTCAGAGGTTGAGGAAGAAAGAGTTAATGGTAAACTTGTTGAAGCCGAAAGAGAAGCTGTTACTGCAACAGAGAAGGCCTTTGTAGAGCTATTAAAGCGCAAAAGGTTGGAAATAATTGCCATCGAGGCCATAAGGAAGGTCAATTTGTTCGAATCTGCCCATGCACGTGAAGTAATGCTAAAAAAAGAGACTGAGGATGCACTGGGAGCTATAATAAAGGATCAGCAAAAATGCTTGGGAGAGAATGAAGAAATTGCTAGTGAGCTACAAAGGGCCATGAGAAGTATTGCCCTTCTAGATAGTTGTGCACAGGAAAAAAACCAGAGGCGAGAAGAAGCTGCAGATGAACTATCACTAATTCAAGCATCCATCTTAACCCTGTGGCATGAAAAGCAGCAGATTAGGAGACAGAAAATGGAAGCCTCCCGTTGGCTTGAGCGGTGGAAAAGTCGTGACAGAGTTGAAGTTACTCACTGCAATCAGGTCATTGGGTTTGCTGAAGAATTACCCGAGGTGGCAGAATTTTCATTATCAGATCTTCAAAATGCAACATGCAATTTTTCTGAGAGCTTCAAAATGAGAGAGGGTGGATATGGTTGTATTTATAAGGGTGAAATGTTGGGTAGAACTGTTGCTATAAGGAAGCTTCATCCACATAATTTGCAAGGACCAGCACAGTTTCATCAAGAGGTTCAGGTTCTTTGTAGTCTCCAGCATCCTCATCTGTTGACTTTGCTTGGATTTTGCCCTGAAGCCTGGTCACTTGTATATGAGTACTTGCCTAATGGAAGTCTTCAAGACTACCTTTTCCGTAAAAATAGTGTTTCCCCGTTGACATGGAATACTCGAGCACGATGGATTGCTGAAATTGCTAGAGCTTTTTGCTTCTTACATTCTTCCAAACCTGAAACTATTATCCATGGTGATCTGAAGCTTGAAACTGTCCTTCTTGATTCTGCACTTAGTTGCAAGATATGTGAATTCGGGTTCAGCAGGCTGGTGACAGAGGAGGAGATCTATCCTTCTAGTTACCGACTGAGCACTGAGACAAATGGTTCTTTTACATATACAGATCCAGAGTTTCGCAGAACTGGAGTACTAACACCTAAGTCTGATATATACTCATTTGGGCTCATCATTTTGCAACTCCTCACTGGCAGGACTCCAGTTGGATTAGCTAGTGAAGTTCGCAGAGCGACTTCATGTGGAAAATTGTCATCGGTTTTGGATTCTTCAGCTGGAGAATGGCCTTTACCTGTGGTATCACGATTGGTTGAACTGGGATTGGAGTGCTGCCAACAAAATCGTAGAGACAGACCAGAAATAACACCTACTCTAGTCAGAGAATTGGAGCAGTTACATGTTTCAGAAGAGCGACCTGTGCCACCGTTTTTCTTGTGTCCAATCCTTCAGGAAATAATGCATGATCCACAAGTTGCAGCAGATGGTTGTACATATGAAGGGAAGGCAATAAGTGAATGGTTGGAAAATGGGCATGAAAGTTCTCCCATGACTAATTTAAAATTGAGTCACTTGCATCTCACTCCCAATCATGCACTCAGACTTGCAATCCAAGGCTGGCTTTGCAAATCTTGA 2478 0.4144 MNMINRKTIKTKVEIFTPSTMELLLMPSHSHHDEHNSMEGKCTEKVHVAVGKSVQKATTLLQWSLTHFNNTHICLIHVYQPSPLIPTLLGKFPASQANPGVVSAFRKEEKEQIMKLLDKYLSICLAAKVKASIVVVEADQVQKGIVDLVNGHNIRKLVIGAIPENFMNVKRNSSKATYAVKNTPSFCEIWFIYKGKHVWTRAACESPHSLSSCAQPEVTTAESLSSRSVQHGMNELSHSERLQSHSARTTICNGIGSLIRSETIETEATFPSKLSSSSSHCSPRSSAGRSVDSHSEVEEERVNGKLVEAEREAVTATEKAFVELLKRKRLEIIAIEAIRKVNLFESAHAREVMLKKETEDALGAIIKDQQKCLGENEEIASELQRAMRSIALLDSCAQEKNQRREEAADELSLIQASILTLWHEKQQIRRQKMEASRWLERWKSRDRVEVTHCNQVIGFAEELPEVAEFSLSDLQNATCNFSESFKMREGGYGCIYKGEMLGRTVAIRKLHPHNLQGPAQFHQEVQVLCSLQHPHLLTLLGFCPEAWSLVYEYLPNGSLQDYLFRKNSVSPLTWNTRARWIAEIARAFCFLHSSKPETIIHGDLKLETVLLDSALSCKICEFGFSRLVTEEEIYPSSYRLSTETNGSFTYTDPEFRRTGVLTPKSDIYSFGLIILQLLTGRTPVGLASEVRRATSCGKLSSVLDSSAGEWPLPVVSRLVELGLECCQQNRRDRPEITPTLVRELEQLHVSEERPVPPFFLCPILQEIMHDPQVAADGCTYEGKAISEWLENGHESSPMTNLKLSHLHLTPNHALRLAIQGWLCKS 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0324 825 SUPERFAMILY Protein kinase-like (PK-like) 465 743 IPR011009 -
Lal1g0324 825 Gene3D Phosphorylase Kinase; domain 1 454 553 - -
Lal1g0324 825 ProSiteProfiles U-box domain profile. 754 825 IPR003613 GO:0004842|GO:0016567
Lal1g0324 825 CDD STK_N 45 195 - -
Lal1g0324 825 PANTHER OS10G0100500 PROTEIN 32 824 - -
Lal1g0324 825 SMART Ubox_2 758 821 IPR003613 GO:0004842|GO:0016567
Lal1g0324 825 PANTHER OS02G0152300 PROTEIN 32 824 - -
Lal1g0324 825 Coils Coil 397 417 - -
Lal1g0324 825 CDD RING-Ubox_WDSUB1_like 759 800 - -
Lal1g0324 825 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 61 167 - -
Lal1g0324 825 Pfam Protein tyrosine and serine/threonine kinase 487 737 IPR001245 GO:0004672|GO:0006468
Lal1g0324 825 Gene3D HUPs 39 161 IPR014729 -
Lal1g0324 825 ProSiteProfiles Protein kinase domain profile. 481 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0324 825 Gene3D Transferase(Phosphotransferase) domain 1 554 754 - -
Lal1g0324 825 Pfam U-box domain 755 824 IPR003613 GO:0004842|GO:0016567
Lal1g0324 825 SUPERFAMILY RING/U-box 752 824 - -
Lal1g0324 825 Coils Coil 299 319 - -
Lal1g0324 825 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 755 825 IPR013083 -
Lal1g0324 825 MobiDBLite consensus disorder prediction 270 303 - -
Lal1g0324 825 MobiDBLite consensus disorder prediction 270 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0324 Lal-Chr1 1966762 1971662 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0324 44 822 U-box Gene Family AT2G45910 36.732 7.78e-171 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lal1g0324 PK_Tyr_Ser-Thr 1.7e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0324 - - lang:109325761 1514.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0324 1 1966762 1971662 Lal1g0324 1 1966762 1971662 ECH