Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0323 ATGGGTAACGGCGTTGGAAAACTAACCGTGTGTTTCACCGCTAACGGTGGTCGCCGAAAACAACACGAAATGTCGTTTTCTATAACGGAGCCATTAGACGAGGGTCTGGGTCACTCTTTCTGTTATGTTCGACCCGACCCGACTCGTTTATCATCTTCTAAGGTCCACTCTGAAGAAACGACGACGTTTAGAACAATTTCCGGTGCATCGGTAAGTGCCAACACATCAACGCCACTCTCAACCGCTTTCGTTGATTTATACTCATACGGTTCAATTGATCGAGCCGCGGCTTTTGAATCTTCTACTTCCTTCGCTTCTCTTCCTCTTCAACCAATCCCAAAGGGTTTAATGAACTCTGGTCCTTTCTCCGGTAACTTAACCGGTTCGGGTCCTATTGAGAGAGGGTTTTTATCCGGTCCGATTGAACGTGGGTTCATGTCTAGTCCGATTGAAAAAGATGTTAACAGTTCAGATCAGTTTCAGAGAAGCTTCTCTCATAACGGATTAGGGTTCAAACCTAAAAAACAAAAGGGTCGTTGGATTCGTGTTCTTCAGAGAGCGATTTCAAAGACTCTGTCTCGTGGGCAGAACTCAATTGTAGCACCGATCAAAGGGGTTATGACTGTGAAGGAACAACAAGAATGGATTGTTGCTGCAGGGGAGAAGAATCATAATGAGAATTTGGCAGTGAATAGTTTGGTTTTCAGTAGTGAGGGTAGTTTGGAAGAAGATGAATTGAAGGAAAGTCAGAATCTTCAATGGGCTCAGGGGAAAGCAGGGGAGGATCGTGTCCACGTCGTGGTTTCTGAGGAACACGGTTGGGTTTTCGTCGGGATTTACGATGGTTTCAATGGTCCTGATGCACCTGATTACCTTTTATCCAATTTGTACACCTTTGTTTACAAAGAATTGAAGGGGTTGCTGTGGGATGATAGTTCTGAACAAGTTGCTGTAAATGTGAATCAGAATTTGGAAGTGCAAGATGGTGATGAATGTTCTCACTGTTTTGATAATAACAATCATCCCTGCACAAGCGACGATGCTGCGGAATTTATTGATGGTTGCAAGAGAAAGAAGGTTAAGAGTTGCAATGGTAACTTCAAAGGTGCTGCCAAAAAATGGGAGGAGAATCAGAGAAGGTGGAAGTGTGAATGGGATAGGGAAAGATTAGAGCTTGATAGAAGATTGAAGGAGCAGTTAACTCGATCTAATTCAGCCGAGAAGAATACTAGCTCGGTTAACCATTTAGATGTGTTGGAAGCTCTTTCTAGGGCTTTGAGGAAAACTGAGGAGTCTTATTTGGATGTTGCTGATAAGATGGTGATGGAGAATCCTGAGTTGGCATTGATGGGTTCGTGTGCGCTTGTGATGTTAATGAAGGGAGGAGATGTTTATGTGATGAATGTTGGTGATAGTAGAGCTGTGTTGGCGCAAAAGATGGAGCCTGATTATTGGCTTGGGAAGCTTAGGCAGGACTTGGAGCAGATCAATGAAGAAACCATGAATGATCTTGAATCCTTGGATGATGGTGATAGATCAAACTTGGTTTCTACTTTAAGTGCTCTTCAGCTTACCAAGGATCATAGTACTAGTGTTGAAGAAGAAGTCCAGAGAATAAAAAAGGAACACCCAGATGATCCCTGTGCAGTTGTAAATGATCGTGTTAAGGGTTCTCTGAAGGTTACCCGAGCTTTTGGTGCTGGATTTCTCAAACAGCCCAAGTGGAACAATGCACTTCTGGAGATGTTTAGAATAGACTATGTTGGAACTTCTCCTTACATCAGCTGCCAACCATATCTAAAACACCACCGGTTAGGCCCTAAGGACAAATTTTTGATTCTATGCTCTGATGGGCTCTATCAATACATGTCAAACGAACAAGCGGTTGCTGAAGTTGAACTTTTCATTACATTGCAACCTGAGGGAGACCCCGCTCAGCATTTGGTTGAAGAAGTGTTATTTCGTGCTGCAAACAAAGCAGGTTTGGACTTCCACGAGTTGCTTGAAATTCCACAAGGCGATAGGCGGCGTTACCATGATGATGTTTCCATCATTGTTATTTCTTTGGAAGGAATGATATGGAGATCATGTGTATAA 2097 0.432 MGNGVGKLTVCFTANGGRRKQHEMSFSITEPLDEGLGHSFCYVRPDPTRLSSSKVHSEETTTFRTISGASVSANTSTPLSTAFVDLYSYGSIDRAAAFESSTSFASLPLQPIPKGLMNSGPFSGNLTGSGPIERGFLSGPIERGFMSSPIEKDVNSSDQFQRSFSHNGLGFKPKKQKGRWIRVLQRAISKTLSRGQNSIVAPIKGVMTVKEQQEWIVAAGEKNHNENLAVNSLVFSSEGSLEEDELKESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYTFVYKELKGLLWDDSSEQVAVNVNQNLEVQDGDECSHCFDNNNHPCTSDDAAEFIDGCKRKKVKSCNGNFKGAAKKWEENQRRWKCEWDRERLELDRRLKEQLTRSNSAEKNTSSVNHLDVLEALSRALRKTEESYLDVADKMVMENPELALMGSCALVMLMKGGDVYVMNVGDSRAVLAQKMEPDYWLGKLRQDLEQINEETMNDLESLDDGDRSNLVSTLSALQLTKDHSTSVEEEVQRIKKEHPDDPCAVVNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGTSPYISCQPYLKHHRLGPKDKFLILCSDGLYQYMSNEQAVAEVELFITLQPEGDPAQHLVEEVLFRAANKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGMIWRSCV 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0323 698 ProSiteProfiles PPM-type phosphatase domain profile. 243 689 IPR001932 -
Lal1g0323 698 Pfam Protein phosphatase 2C 409 639 IPR001932 -
Lal1g0323 698 Coils Coil 490 510 - -
Lal1g0323 698 PANTHER PROTEIN PHOSPHATASE 2C 20 698 IPR015655 GO:0004722|GO:0006470
Lal1g0323 698 PANTHER - 20 698 - -
Lal1g0323 698 CDD PP2Cc 405 689 IPR001932 -
Lal1g0323 698 SUPERFAMILY PP2C-like 258 690 IPR036457 -
Lal1g0323 698 SMART PP2C_4 245 687 IPR001932 -
Lal1g0323 698 Gene3D - 220 693 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0323 Lal-Chr1 1961635 1964907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0323 1 698 PP2C-type Phosphatase Gene Family AT1G07630 66.806 0.0 905
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0323 - - pvu:PHAVU_011G064200g 1076.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0323 1 1961635 1964907 Lal1g0323 1 1961635 1964907 ECH
Lal1g0323 1 1961635 1964907 Lal2g0228 2 1329875 1333123 LSH