Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0317 TTTCGGGGTGAGCAGATATTAGACTACGGCTATCAGGTACCAGCCACAGCCCGACGAACCCGATCAACCAGGAGGAGGGCTAAATTTCAAAGAACAGTGGACGAAAATCAAATGTGTGTGTTTGACATATTGGCCACCATAGCTGGTAAGATATTGCAAGAGAACAGGATTCCAACCATGACTACTGATATATCATCAGAAAAGGATCATAGTGGATTTGATAAAGAGTGCCAGAATGCAAATAAATCATTCAAAGCTGAGCTTTCTAATGAAGGAAGTTGTGGCAAAAAGTGTTTCTCTCCTCTTTCATCACAAACAAACAATCTGAACTGCTGTTTGAAAGAATTCCCACATCCTGAAATTGATGGTCATTCAGGCATTGCTTCTATAGTAACAAGTTCTAGTTTCTTGGAGAGGGTTGTTCCTAATAATTTAGTGGATGGCAAAAGCCATAAAGAAGTGGAAAACATTACTAGCAATGCTAAATTAGATTCCCCTGGTTATGCAGAGGTTAGTTGTTGCAAGTTAGATTGTGATACAAGTGAAGTAAAGGATGAGCTTCATAAGTTCGAGAACATGCCAATTGAAACTGGGACTAAGATGTGCTGCTTTGAGGATCCATTGAATGAAAACCATCCCACACTGATCAGTTTAGATGACAATGCCAAGTTGTCCAGGTATAATGATGAGATTCCCTGTAGTTCATTGTCCAAAGGTTGTGGCAATGTACCTGTAGTTAGTAGAGATGATGACGAAATTTTTTTTGGGTGTTCTCACCCTTGTACCAAACCAAAGTCCTTTAGGCCAATGACTAGTATAGGTGATAGAGTCAGGAAAACTTTGGCTTCTAAATATTCAAAAGTTGCTCAAGAATCAAAGGTTGATATACATTCTAGCAGCGATGGAGATTTTAAGCCAACTTTCCACAGTAAGAAGTATTGCTATAAACGCCAAAGATCTCAGATAAATATTCCTTTGAAGAAGAGGAAGCTTTTTCAATATAGCTCTGTTTCAAATTCCAAAGGATTTCTCAGAAGTGGTGCCATTTATTATTCACCCGTAAATGATACGAGTCACAATGCTCCTGGTTCATCTCCTGGGAGGATGAGAGAAGACTGTGGAATAGAATCCTTGGAAGCACATCAACAGTCTGCATTACGATGTGGAGGTTCTCATGTGAAGCTTAGGATCAGTTCATTTAGAGTCCCAGAGCTTTCTATTGAGATTCCAGAAACTGCAACCATTGCCTCCTTGAAGAGGACAGTCATGGATGCATTGACTGCTTTACTTGGAGGTGGGTTACGTGTTGGTGTCAGTTTCCAGGGGAAGAAAGTTACAGATGACAGTAAAACTCTTCTTCAAACTGGAATTTATCTTGATAACCAGGTGGATGCTTTTGGTTTCACCCTGGAACATAATTCTTCACCAAGCCTACCGCATTTATCTGCTGAAAATTTCCCCCATGTTCCCAGTCTAGAGATATGTCAGTCTCCAATAAGTCTGGCTGTAATTCATCGGAGGAGTCAGGGCAGTCTTGACATGTTACCTGAGCTTCAAGTAACCAATTCAGGCAACTTTGTTGAAAGTGACCATGATTCTGCACCTTCTCCTATCAACGCACCTGTTGTCAAAGGTAGGAAAGATTACAAAACACTGTATACTGTTCCTGAAATGGTTGAGGAGGAACTAGCTATGATACCCGTGCTCCAGAAGTCAAAGCTATCTGAGATTGTGCAGCGCCGAATTCGTAGACCCTTTTCTGTTGATGAAGTGGAAGCACTGGTTCAAGCAGTTGAGAAACTGGGAACTGGAAGGTGGCGTGATGTTAAAATTCGTGCTTTTGAGAATGCAAAGCACCGGACATATGTGGATTTGAAGGATAAATGGAAAACACTGGTGCACACGGCAAGAATATCCCCTCAGCAAAGGAGGGGAGAGCCTGTTCCCCAAGAACTTTTGGACAGGTTCCTCTTGTTTCTGGAATCAGTTATTGAAGCTCCTTCTCTCTTCTATTTCACTTTCCCAAACCACTCTTCCCTAGGGTTTCTAATTCTTCCCAATTTTATCAACCGATTTAATTTCAACCCATCATCCATCAACTTTGGTTTCATGAATCGTAACCCTTTTCTCCTTCCACCTTATGATCCAATCATTTCTCAAAACCCTTCTTCCATGCCCACAATTACTAATACTGATGAAGACTCTCCCTTGGATTATGAGGCTGAATTCTCTGCAACCGTGCTACGTTACATTAATCAAATGCTAATGGAAGAGGACATGGAAGAAAAGCCTTGTATGTTCCATGATTCTTTGGCACTTCAAGCCGCTGAAAAATCTTTGTATGAGGTCATTGGTGGGACATACCCGTCTTCTTCGGTTCAAAACTATCACAATTTGGATAGCCCGGTTGATAGTCTTTCTAGTAACTTCAGTGGTTATAGCAGTTTTGGTACTGCTAGTACAAGTAACTCGCATGATCCTACTTACTTGAGTCATGTTGATCTTGGAGACTATACGCCTTCTATAAGGCAAACAAGTTTTGATCATGACTTTGTTTTCAAGGCGAGTTCAATCCCAAACAATCAACTGTCAATGAACAATAATCGATTCTTCGGAAGTTCTGGGGATTGTTTTTTAGATTCAACATTGTTTAGTAACTGTAAGAGTGAGTCAGTGCTGCAATTTGAGAGAGGTGTTGAGGAAGCTAGTAAGTTTCTGCCTAAAGCGAATCCATTGGTTATTGACTTGGAGAACAACAGATTTACCCCATATTTTCATAATGGTCCCAAGCAGGTGGTGATTAAGATGGAGAGAGATGAAAGAGAGCATTTTTCAGCTGAGTCAAGAGATAGGAAAAATCACGAGCGAGAAGATGAATTAGATTTGCGAGATGGAAGAAGCAGCAAACAATCAGCAGTTTACAGGGATGAGAGTGAAGAGCTATCAGAATTATTTGATAAGGTGTTGCTAGGTAGTGTGTGTGGAAATAAGGGAACTCCTTTGTGTATTCTCAATGAAGACCACAATAATAATGGATCAGAGACTAGTATGCAGAAAAATGAAGAATCAAACAGGTATGGTAGCGGAAAGAGTCGTGTTAAGAAACAAAGCAACAAGAAGGGAGTTGTGGATTTGAGGACTATATTGGTTATGTGTGCACAAGCTGCTTCTTCTGATGATCGTGTAACTGCTAACGACTTATTAAAGCAGATTAGGCAACATTCTTCCCTGCGGGGTGATGGTTCTCAGAGGCTGGCACATTGCTTTGCAAATGCCCTTGAAGCACGCTTGGCGGGTACTGGCACTCAGATTTACACTGCTTTGTCCTCCAAGAGAACCTCTGCTGCAGACATGGTGAAAGCTTACCAAATGTATATTTCAGCCTGCCCATTTAAGAAGCTTTCGCTCATCTTTGCAAACCATACAATTTTGAGTCTAGCCAGACCCAAGGAAGTGGAAACTCTTCATATTGTAGATTTTGGTATCCGTTATGGCTTCCAGTGGCCTGCCCTTATTGTTCGTCTAGCAAAACGTCCTGGTGGTCCTCCCAAGCTGCGCATGACAGGGATAGAGCTACCACAACCTGGTTTCAGACCAGCACAGAGCGTCGAGGAGACAGGGCGTCGCCTAGCAAAGTATTGTGATCGATTTAATGTTCCATTTGAGTTCAATGCTATTGCACAGAAATGGGAAACCATCAAAATTGAGGACCTAAAGATAAAGGAAAATGAACTTGTTGTTGTGAATAGTATGGTACGGTTCCAGAATCTACTTGATGAAACAGTTGTTTTGAATAATCCCAAGGATGCTGTTCTAAACTTAATTAGGAAGGCAAATCCCAGTATTTTTATACATACTACTGTCAATGGGAGCTATAGTGCACCATTCTTTGTGACACGGTTCCGCGAGGCTCTTTTCCATTACTCTACATTGTTTGATGTTCTTGACACAAATACTGCCCATGAAGATCCTATGAGGTTGATGTTTGAGAAGGAGTTCTTTGGGCGAGAGGTAATGAATATTATAGCCTGTGAGGGTACTGAGAGGGTTGAGAGGCCCACAACATACAAGCAATGGCAGGTTCGGAAAATGAGGGCTGGATTTAGGCAACTGCCATTGGATCACCATCTCATTAACAAATTAAGGTGCAAGATGAAAGATGTGTACCACAGTGATTTTATGCTTGTTGAAGATGGCAACTGCATGCTGCAAGGTTGGAAGGGCCGAATCATTTATGCTTCTTCCTGTTGGGTACCCACATAG 4263 0.415 FRGEQILDYGYQVPATARRTRSTRRRAKFQRTVDENQMCVFDILATIAGKILQENRIPTMTTDISSEKDHSGFDKECQNANKSFKAELSNEGSCGKKCFSPLSSQTNNLNCCLKEFPHPEIDGHSGIASIVTSSSFLERVVPNNLVDGKSHKEVENITSNAKLDSPGYAEVSCCKLDCDTSEVKDELHKFENMPIETGTKMCCFEDPLNENHPTLISLDDNAKLSRYNDEIPCSSLSKGCGNVPVVSRDDDEIFFGCSHPCTKPKSFRPMTSIGDRVRKTLASKYSKVAQESKVDIHSSSDGDFKPTFHSKKYCYKRQRSQINIPLKKRKLFQYSSVSNSKGFLRSGAIYYSPVNDTSHNAPGSSPGRMREDCGIESLEAHQQSALRCGGSHVKLRISSFRVPELSIEIPETATIASLKRTVMDALTALLGGGLRVGVSFQGKKVTDDSKTLLQTGIYLDNQVDAFGFTLEHNSSPSLPHLSAENFPHVPSLEICQSPISLAVIHRRSQGSLDMLPELQVTNSGNFVESDHDSAPSPINAPVVKGRKDYKTLYTVPEMVEEELAMIPVLQKSKLSEIVQRRIRRPFSVDEVEALVQAVEKLGTGRWRDVKIRAFENAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRFLLFLESVIEAPSLFYFTFPNHSSLGFLILPNFINRFNFNPSSINFGFMNRNPFLLPPYDPIISQNPSSMPTITNTDEDSPLDYEAEFSATVLRYINQMLMEEDMEEKPCMFHDSLALQAAEKSLYEVIGGTYPSSSVQNYHNLDSPVDSLSSNFSGYSSFGTASTSNSHDPTYLSHVDLGDYTPSIRQTSFDHDFVFKASSIPNNQLSMNNNRFFGSSGDCFLDSTLFSNCKSESVLQFERGVEEASKFLPKANPLVIDLENNRFTPYFHNGPKQVVIKMERDEREHFSAESRDRKNHEREDELDLRDGRSSKQSAVYRDESEELSELFDKVLLGSVCGNKGTPLCILNEDHNNNGSETSMQKNEESNRYGSGKSRVKKQSNKKGVVDLRTILVMCAQAASSDDRVTANDLLKQIRQHSSLRGDGSQRLAHCFANALEARLAGTGTQIYTALSSKRTSAADMVKAYQMYISACPFKKLSLIFANHTILSLARPKEVETLHIVDFGIRYGFQWPALIVRLAKRPGGPPKLRMTGIELPQPGFRPAQSVEETGRRLAKYCDRFNVPFEFNAIAQKWETIKIEDLKIKENELVVVNSMVRFQNLLDETVVLNNPKDAVLNLIRKANPSIFIHTTVNGSYSAPFFVTRFREALFHYSTLFDVLDTNTAHEDPMRLMFEKEFFGREVMNIIACEGTERVERPTTYKQWQVRKMRAGFRQLPLDHHLINKLRCKMKDVYHSDFMLVEDGNCMLQGWKGRIIYASSCWVPT 1420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0317 1420 CDD SANT_TRF 584 634 - -
Lal1g0317 1420 ProSiteProfiles GRAS family profile. 1036 1418 IPR005202 -
Lal1g0317 1420 Pfam GRAS domain family 1045 1417 IPR005202 -
Lal1g0317 1420 ProSiteProfiles Myb-like domain profile. 578 633 IPR001005 -
Lal1g0317 1420 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 579 637 IPR017930 -
Lal1g0317 1420 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 719 1419 IPR005202 -
Lal1g0317 1420 Gene3D - 571 663 - -
Lal1g0317 1420 MobiDBLite consensus disorder prediction 940 974 - -
Lal1g0317 1420 SUPERFAMILY Homeodomain-like 580 655 IPR009057 -
Lal1g0317 1420 MobiDBLite consensus disorder prediction 1008 1037 - -
Lal1g0317 1420 SMART sant 582 635 IPR001005 -
Lal1g0317 1420 PANTHER SCARECROW-LIKE PROTEIN 14 719 1419 - -
Lal1g0317 1420 MobiDBLite consensus disorder prediction 1008 1024 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0317 Lal-Chr1 1929106 1937800 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0317 747 1420 GRAS Transcription Factor Family AT1G07530 55.172 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal1g0317 GRAS 5.3e-110 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0317 - - ahf:112736647 1061.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0317 1 1929106 1937800 Lal1g0317 1 1929106 1937800 ECH
Lal25g0138 25 862262 866729 Lal1g0317 1 1929106 1937800 PCT
Lal8g0099 8 718746 720689 Lal1g0317 1 1929106 1937800 PCT
Lal1g0317 1 1929106 1937800 Lal8g0100 8 722464 725804 PCT