Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0316 ATGCTTTCTACAGATTCCTTTCTGGAAGGTTTTCCTGGTTCTGTGAATGGATTCATATTTGAAAGTGGTTCTATCTCAGTATATACGTATCAGAACTCAGGAAATGGGTTTAAAGTGGAAGATTCTTCTTCCCCTTCAAACCATTCAGAATCTCCCACTCATTCTGGTTCTTATTCTGTCTCAAATAGAGAATCTGCTGATTCTACTAAACATTCCAATCCTATTCTGAGATACATTAGTGATATCCTCATGGATGAAGAAGATGACTTGGAGCGTAAACCATGCATGTTGCAGCATTGTTTGAAACTCCAGGCTGCTGAAAAATCATTCTATGACGCGCTCGGTCCTAGCTATCCTTCATCACCAAACCAAATCCAAGGTTGTTTCCAACAAGATAGTTCTGACCCTGATGATAATTCAGGTAGAACTATTAGTTATGACAGCAATAGCAGCTACACCATTGATCACTCATCAGTATATGAGTCTGATTGGGTTTATGGTGCTGGTGATTTTAAGTCTTTTTTCATGTATAGGCATAACTCTCTACTTGATGATATAGCTCTTGGTCCATTTAGAGAGACACAAGCTCTTGGAACCTGGAATAATATTGTTCAGTCTCAGATCAAGCCACATACAATTGAAGCAACCACAGGATCAAAGGAAAAAAGAATACATCATATGGATGATATCTCAATTGAAGAAAAAGAGAGAGTGAGCAAGGTTTCTGCTATATACTCTGATGATTTAGAACCATCAGACATGTTTGATGAGGTACTTCTTTGTAAGGAAGGAAAAAGTCCTACCACATTTTGTGCCGATCGTGAACCATCACAACAAAATGCTGTTGATTCAAGAGGATCTAATGGAAAAGCGACACGTACAAAGAAAGGTAGCAAAAGGGGGACAAGTACAAGTACAACTGTAGATTTATGGACTCTTCTAACTCAGTGTGCACAGGCAGTGGCAAACTATGATCAAAGGAATGCAAATGAAATACTCAATCAGATTAGGAAGCACTCTTCAGCTTTTGGTGATGGACTTCAGCGTTTAGCTCATTACTTTGCCATTGGTCTTGAAACACGATTAGCTGCTGGGACACCAAAGTATATGCAACTTCATCTAGCATCTGCTGCAGATATGTTGAAAGCTTACAAATTATACATTACAGCATCTCCATTTCAGAGCATGTCAAATTTCTTGGCTAACAGAACTATTCTAAAGCTAGCAGAAAATGAACGCAGCCTTCACGTTATTGACATTGGCATTGGGTATGGTTTCCAATGGCCTTGCCTCATCCAACGTCTTTCGGAAAGACCAGGTGGGCCTCCGAAGCTACGAATCACAGGAATTGATCTTCCTCAACCAGGATTTCGGCCTGCGGAAAGGGTTGAGGAGACGGGACAGCGACTACAAAATTACTGCAAGAGGTTCAAAGTGCCATTTGAGTACAATTGCCTTGCACAGAAATGGGAGACTATAAGTCTTGAGGATCTCAAGATTGATAGGAATGAAGTAATAGTGGTTAACTGTTTGTACAGATTGAAGAACCTGTCTGATGAAACTGTGAGTGTGAACAGTCCCAGAGATGCTGTATTAAGGTTGATCAGGAGGATTAATCCAAACATCTTCATACATGGGGTTGTTAATGGCACTTACAATGCACCGTTTTTCTCGACAAGGTTCAAGGAAGCACTCTTTCACTTCTCAGCATTGTTTGATATGTTCGAGGCTAATGTGTCGCGCGAGGATCCACATAGGCTGATGCTTGAGAAAGGGTTGTTTGGAAGGGATGCAATCAATGTTATAGCATGTGAAGGCACAGAGAGGGTTGAAAGGCCAGAAACTTATAAGCAGTGGCAGGTTAGGAACCAGAGAGCAAGGTTCAAACAAATTTCATTGGCTCCAGAACTATTGAATAGAGTCAAAGAGATGGTAAAGAAGGAACATCATAAGGATTTTGTAGTGAGTGAGGATGGCAAGTGGGTTTTGCAAGGATGGAAAGGGCGTATTCTGCATGCACTTTCTTCTTGGGTTCCTGCTTAA 2043 0.4082 MLSTDSFLEGFPGSVNGFIFESGSISVYTYQNSGNGFKVEDSSSPSNHSESPTHSGSYSVSNRESADSTKHSNPILRYISDILMDEEDDLERKPCMLQHCLKLQAAEKSFYDALGPSYPSSPNQIQGCFQQDSSDPDDNSGRTISYDSNSSYTIDHSSVYESDWVYGAGDFKSFFMYRHNSLLDDIALGPFRETQALGTWNNIVQSQIKPHTIEATTGSKEKRIHHMDDISIEEKERVSKVSAIYSDDLEPSDMFDEVLLCKEGKSPTTFCADREPSQQNAVDSRGSNGKATRTKKGSKRGTSTSTTVDLWTLLTQCAQAVANYDQRNANEILNQIRKHSSAFGDGLQRLAHYFAIGLETRLAAGTPKYMQLHLASAADMLKAYKLYITASPFQSMSNFLANRTILKLAENERSLHVIDIGIGYGFQWPCLIQRLSERPGGPPKLRITGIDLPQPGFRPAERVEETGQRLQNYCKRFKVPFEYNCLAQKWETISLEDLKIDRNEVIVVNCLYRLKNLSDETVSVNSPRDAVLRLIRRINPNIFIHGVVNGTYNAPFFSTRFKEALFHFSALFDMFEANVSREDPHRLMLEKGLFGRDAINVIACEGTERVERPETYKQWQVRNQRARFKQISLAPELLNRVKEMVKKEHHKDFVVSEDGKWVLQGWKGRILHALSSWVPA 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0316 680 ProSiteProfiles GRAS family profile. 301 678 IPR005202 -
Lal1g0316 680 MobiDBLite consensus disorder prediction 122 148 - -
Lal1g0316 680 Pfam GRAS domain family 312 677 IPR005202 -
Lal1g0316 680 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 31 679 IPR005202 -
Lal1g0316 680 MobiDBLite consensus disorder prediction 271 288 - -
Lal1g0316 680 MobiDBLite consensus disorder prediction 38 71 - -
Lal1g0316 680 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 31 679 - -
Lal1g0316 680 MobiDBLite consensus disorder prediction 269 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0316 Lal-Chr1 1924578 1926620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0316 6 679 GRAS Transcription Factor Family AT2G29060 45.044 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal1g0316 GRAS 1.1e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0316 - - gmx:100815586 956.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0316 1 1924578 1926620 Lal1g0316 1 1924578 1926620 ECH
Lal1g0316 1 1924578 1926620 Lal2g0218 2 1269321 1275161 LSH