Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0308 ATGGAACATGATAAAGTGCCAATCTTGGAAGGAAGGTCCAGCCAGGAAATTGAGATACCCATCATCTCTGAGAAGCTTGAAGTTGTTCATAAGACAATGGAATCATATTGCAATTCTGTTTGTGCTTTTTCCAAACAAGAAAACAGTGTTGCAGCATCAGAAGAGTCATCAAAGTCAGCAAAGAAGCTTTGTGGACTCATAGTTTTCTATGCTATTGTAATGCTTGTGGAAATTGTGGGTGGTATAAAAGCAAACAGTTTAGCAGTCATCAGTGATGCAGCACACTTGCTTTCTGATATCGCCGGATTCTTAATCTCGCTCTTTGCAGTTTGGGCTTCAGGCTGGGAGGCAACACTAGATCAATCTTTTGGGTACAATCGTCTTGAGGTTTTGGGTGCATTTTTGTCTTTGCAGTTAATTTGGTTTATATCTGGTTATTTGATTTATGAAGCAGTTGGTAGAATTCTCCTCCGAAATTCCGAGGTGAATGGCATGCTCATGTTTGGAATTGCAGCATTTGGGTTTGTTCTTAATTTTATCATGGTTGTATGGCTTGGTCATGATCATCACCATCATCATGGCTTTGGAGTCTCAGATCATAATCATAGTCATCATCACCATCATCATGGCCATGGAGACTCGGATAACGATCATGGTCATCATCATGGCCATGGAGACTCGGATAAAGATCATGGTCATCATCATTGCAGTGAACACTCAAATCATGATCATGTGAAGGAGGAACTAACTAAAATAAATGATGAGGAGAAACTTGAACTGCTTTCAAGTGATCATAGTAATAGTAATGTCTTCAACATAAATCTACAAGGGGCTTATTTGCATGTCATGGTTGATATGATACAATCTGTTGGAGTGATGATAGCTGGAGCCATAATATGGGCTAAACCAGAATGGTTAGTGGTTGATCTTATGTGTACTCTTATATTTTCTGTCATATCTTTGAGTACTACTGTGCCTATGCTTAAGAATATTTATGGCATTTTGATGGAGAGAACACCAAGTGAGATAAATATCATTAATCTGGAAGATGGGCTCAAAAGTATCAAAGGAGTGCAGGATATTCATGACTTGCATGTTTGGTCCATAACAGTTGGAAAAAATGTTCTGTCTTGCCATATATTAGCTGAGTCTGGGATCAGTTCAGTTGACTTACTTGGCAAGATTAAGGATTACTGCAAAAGAACACATAAAATAGAACATGTATACAAAAGGCGTCCCAATACCTGTCACCCAAAAGATAAGAGTGTTGCAATGAGATGA 1281 0.3864 MEHDKVPILEGRSSQEIEIPIISEKLEVVHKTMESYCNSVCAFSKQENSVAASEESSKSAKKLCGLIVFYAIVMLVEIVGGIKANSLAVISDAAHLLSDIAGFLISLFAVWASGWEATLDQSFGYNRLEVLGAFLSLQLIWFISGYLIYEAVGRILLRNSEVNGMLMFGIAAFGFVLNFIMVVWLGHDHHHHHGFGVSDHNHSHHHHHHGHGDSDNDHGHHHGHGDSDKDHGHHHCSEHSNHDHVKEELTKINDEEKLELLSSDHSNSNVFNINLQGAYLHVMVDMIQSVGVMIAGAIIWAKPEWLVVDLMCTLIFSVISLSTTVPMLKNIYGILMERTPSEINIINLEDGLKSIKGVQDIHDLHVWSITVGKNVLSCHILAESGISSVDLLGKIKDYCKRTHKIEHVYKRRPNTCHPKDKSVAMR 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0308 426 MobiDBLite consensus disorder prediction 196 246 - -
Lal1g0308 426 TIGRFAM CDF: cation diffusion facilitator family transporter 61 408 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Lal1g0308 426 MobiDBLite consensus disorder prediction 210 246 - -
Lal1g0308 426 SUPERFAMILY Cation efflux protein transmembrane domain-like 60 337 IPR027469 -
Lal1g0308 426 Gene3D Cation efflux protein transmembrane domain 59 335 IPR027469 -
Lal1g0308 426 PANTHER METAL TOLERANCE PROTEIN B 1 211 - -
Lal1g0308 426 PANTHER METAL TOLERANCE PROTEIN B 219 408 - -
Lal1g0308 426 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 211 - -
Lal1g0308 426 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 219 408 - -
Lal1g0308 426 Pfam Cation efflux family 67 336 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0308 Lal-Chr1 1860093 1862048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0308 41 408 Inorganic Solute Cotransporters AT2G46800 48.641 2.67e-103 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0308 K14689 - gmx:100777590 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0308 1 1860093 1862048 Lal1g0308 1 1860093 1862048 ECH
Lal1g0308 1 1860093 1862048 Lal2g0206 2 1215063 1216923 LSH