Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0306 ATGCTTCCTGGGTTCACCAACGAGGATGTTCTTGTTGAGCTACAAGATGAGAAGGTGCTTCAGGTGAGTGTGGAGAGTGGTAACTTCATGAGCAGGTTCAAGATCCCAGATGATGGAAACCTTGAATTGCTTAAGGCTATTATGCATAATGGTAACTCAGAAATTCTTTTCGATAATTGGCCTGGTGATAAAACTGGCATGTACGTCTTGGCCTTAGTGTTTGTGTTTCTCATGTCCTTCCTAGTTGAATTTCTCTCTAGCACCCGGTTCACCAAACCCGGTTCGAACCACTTGGCGGCCAATAGTTTGGTTCAGACCCTATTGCACCTACTCAAGGTTGGGTTGTGTTACTTGGTCATGCTAGCACTCATGTCTTTCAACGTTGGAGTTTTCTTGGTTGCTGTGATTGGTCATGCTATGGGGTTCTTCTTCTTTGGTAGCAATGCTTTCAAGAAAAGAGATCCATGTCAAGAGTAA 477 0.4403 MLPGFTNEDVLVELQDEKVLQVSVESGNFMSRFKIPDDGNLELLKAIMHNGNSEILFDNWPGDKTGMYVLALVFVFLMSFLVEFLSSTRFTKPGSNHLAANSLVQTLLHLLKVGLCYLVMLALMSFNVGVFLVAVIGHAMGFFFFGSNAFKKRDPCQE 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0306 158 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 51 153 IPR007274 GO:0005375|GO:0016021|GO:0035434
Lal1g0306 158 PANTHER COPPER TRANSPORTER 6-LIKE 51 153 - -
Lal1g0306 158 Pfam Ctr copper transporter family 53 90 IPR007274 GO:0005375|GO:0016021|GO:0035434
Lal1g0306 158 Pfam Ctr copper transporter family 93 145 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0306 Lal-Chr1 1854517 1855722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0306 52 152 Inorganic Solute Cotransporters AT5G59030 50.962 9.09e-31 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0306 K14686 - rcu:8279809 143.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0306 1 1854517 1855722 Lal1g0306 1 1854517 1855722 ECH
Lal1g0306 1 1854517 1855722 Lal9g0211 9 1296595 1297062 LSH