Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0302 ATGGACTTGAAGTCAAATCATACACCTGTTCTCACCGATTCTGCCGCACCAATAAATATAACAAAGTCAAGACTGGGTGTGCATTCTAGTTTGTTGCCTTACTCCCCGACTGGGACAACCATTCCCCACGGTATGTTGTTGACTATCCCAAGGAAGAAGGCCGGATTTCTTGAAGATGTTCGTTCCAGTGCTTGGTTGGATGCCATGAAATCATCTTCTCCTCCACCCAGAAAGATAACAAAGGATGTTAGTCATGGGTTTACATCATCTGAAGCTGACTCTTCTTATTTTTCCTGGCTGCTAAAGTATCCATCGGCACTTGCATCTTTTGAGCAAATCACAAGCTATGCAAAAGGAAAGAGAATAGCACTGTTTCTGGACTACGATGGAACTCTTTCACCAATTGTGGATAATCCTGACTGTGCTTTTATGTCTGACAATATGCGTGCTGCCGTTAAAAAGGTTGCGGAGTATTTTCCAACAGCTATAATTAGTGGAAGAAATCGTGACATGGTGTATGAATTTGTAGGACTAACAGAACTATATTATGCTGGTAGTCACGGGATGGACATCATGTGCCCGGTTAAGTCTACTAACAAGCAAAAGCAGGATAAGGAAGTTAATTTATTCCAACCTGCTGCCGAATTCCTGCCCATGATTGACGAGGTATTTAGGTCTCTCGTTGAGACTACTAAAGACATTAAAGGTGCAAAAGTTGAAAACAATAAATTTTGTGCCTCTGTACATTACCGCAATGTAGATGAAAAGAGTTGGGATTTAGTGGCGCAACGTGTCCACGATGTCTTGAAGGGCTATCCACGTTTGCGTTTAACTCACGGGCGCAAGGTTTTAGAGGTCCGACCTGTGATTAACTGGGATAAGGGAAAAGCTGTCACATTTATACTTGAGTCACTTGGACTCGCCAATTGTGATGATGTGCTTCCTATATATATTGGAGATGACCGGACAGATGAAGATGCATTTAAGGTTTTGAGAGAAGGAAATAAAGGTTATGGGATCTTAGTGTCTTCAGCACCAAAGCAAAGCAATGCAAATTACTCTCTTCGTGATCCATCAGAGGTCATGGAATTTCTTAAGTCACTTGTTGCATGGAGGTCAACAAGCCAAGCCTTCTGA 1137 0.4222 MDLKSNHTPVLTDSAAPINITKSRLGVHSSLLPYSPTGTTIPHGMLLTIPRKKAGFLEDVRSSAWLDAMKSSSPPPRKITKDVSHGFTSSEADSSYFSWLLKYPSALASFEQITSYAKGKRIALFLDYDGTLSPIVDNPDCAFMSDNMRAAVKKVAEYFPTAIISGRNRDMVYEFVGLTELYYAGSHGMDIMCPVKSTNKQKQDKEVNLFQPAAEFLPMIDEVFRSLVETTKDIKGAKVENNKFCASVHYRNVDEKSWDLVAQRVHDVLKGYPRLRLTHGRKVLEVRPVINWDKGKAVTFILESLGLANCDDVLPIYIGDDRTDEDAFKVLREGNKGYGILVSSAPKQSNANYSLRDPSEVMEFLKSLVAWRSTSQAF 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0302 378 Gene3D - 122 211 IPR023214 -
Lal1g0302 378 Gene3D - 224 377 IPR023214 -
Lal1g0302 378 Pfam Trehalose-phosphatase 125 359 IPR003337 GO:0003824|GO:0005992
Lal1g0302 378 SUPERFAMILY HAD-like 123 371 IPR036412 -
Lal1g0302 378 TIGRFAM T6PP: trehalose-phosphatase 119 369 IPR003337 GO:0003824|GO:0005992
Lal1g0302 378 CDD HAD_TPP 123 363 - -
Lal1g0302 378 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 375 IPR044651 GO:0004805|GO:0005992
Lal1g0302 378 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 124 332 IPR006379 -
Lal1g0302 378 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE A 1 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0302 Lal-Chr1 1813938 1819423 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0302 116 368 Trehalose Biosynthesis Gene Families AT1G70290 28.148 2.56e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0302 K01087 - gmx:100819495 634.795