Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0294 ATGTCGACAACCACCGCACACGGCGGCGAATCTCCCTCCACCCTTGAAACCCCGACGCTAGATAAGGAGTCTCGCGAGCTCCTACAAACCATTTCCGAGCACGGCGGGTACGCCTATGTGAGTATGGCAGCGATGGCAGCCGCCGGAGACTTCCGCGCCGCCGAAGCGGCACGGGAAATGTCGTGGGAGCAGCTTCACTCAGGTCCGTGGCACTCGGTGCTTCCTGTGTGGCGCGACGCGTACTCGATGGCTTGCCTCCACGTAGCGAAGCACCACTATGGCAATGGCGAATTCAAAGAAGCGCTTAGGGTTTTGGATATGGGGATCATCATGGGAGGAACGCTCCTAATAAAGGATCTGCACTCTGCTGTTGATAAGGTTTCCGAGAAATCAAGGAACGTTAAGGTTTGTGATGGAATGTGTGAAGATTTAGAAAACTCCGATCATAGACTCGTTGGTCAAGAATTTAATATGACTAAGGTACTCCAGCTTTTACCTGTTAAATCCCTTACTTCTAAGCTCGTGGTGAAGAGGTCCGCACTCTCATTGGAGAAGTTCCTGACAGATCATTACCTTTCCAGCTCACCAGTTATAATCAGTGATTGTATGGCTCATTGGCCGGCCAAGATGAAGTGGAATAACATAGATTACTTGCTAAGAGTTGCTGGTGACCGTACCGTTCCGGTTGAGACCTTTTCTGTCACAGCAAAGTTGTTGAAGTTCTTTAGCAGTATACAGGTTGGGAAGAACTACTTATGTGCAGAGTGGAAGCAAGAGCTAATTACATTTTCAGAGTTTCTTCAGCGGATAAAGTCAAATGACCATTCTCCTGTTGGTCCTACATATCTTGCTCAACATCCATTATTTGATCAGATAAGTGAGCTTCGGAAAGATATCTTTATTCCCGACTATTGTTTTACTGGCGGAGGGGAGCTAAGATCTCTCAATGCTTGGTTTGGTCCAGCTGGAACGGTAACACCATTACATCATGATCCACATCATAACATACTAGCTCAGCGCAATTGGCGGGATTCGATCCCCACGGATGCTCTCCATCCTACTTTCCTTCCCCTATCCCCCATCCTCCCAGGCCTTACTAGGAGGGCCTTGCCAGACCCTCAAGGTGGGCTTTATCAACAACAAAAAAGTTCTGCTTATGTTGTTATTGGAAAAAAATACATCAGGCTTTACTCGGCATCTTTGTCAGAGGATCTTTCCCCCTATCCTGATACCATGCTTAGAAATTCCAGCCAGGTTGACTTAGATGACATAGATGTAAGGAAGTTTCCCAAAGTAGCAGACCTGGAATTTGTAGACTGCATTTTAGAGGAAGGTGAAATGTTATATATCCCACCAAAATGGTGGCACTATGTTCGGTCTTTAACTCCCAGTTGTTCGGTTAGCTTTTGGTGGAGTGAGGCTGAAAGTTCTGATGCATACTAA 1443 0.4692 MSTTTAHGGESPSTLETPTLDKESRELLQTISEHGGYAYVSMAAMAAAGDFRAAEAAREMSWEQLHSGPWHSVLPVWRDAYSMACLHVAKHHYGNGEFKEALRVLDMGIIMGGTLLIKDLHSAVDKVSEKSRNVKVCDGMCEDLENSDHRLVGQEFNMTKVLQLLPVKSLTSKLVVKRSALSLEKFLTDHYLSSSPVIISDCMAHWPAKMKWNNIDYLLRVAGDRTVPVETFSVTAKLLKFFSSIQVGKNYLCAEWKQELITFSEFLQRIKSNDHSPVGPTYLAQHPLFDQISELRKDIFIPDYCFTGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQRNWRDSIPTDALHPTFLPLSPILPGLTRRALPDPQGGLYQQQKSSAYVVIGKKYIRLYSASLSEDLSPYPDTMLRNSSQVDLDDIDVRKFPKVADLEFVDCILEEGEMLYIPPKWWHYVRSLTPSCSVSFWWSEAESSDAY 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0294 480 ProSiteProfiles JmjC domain profile. 275 480 IPR003347 -
Lal1g0294 480 MobiDBLite consensus disorder prediction 1 21 - -
Lal1g0294 480 SMART cupin_9 281 479 IPR003347 -
Lal1g0294 480 Gene3D Cupin 174 472 - -
Lal1g0294 480 Pfam Cupin-like domain 386 474 IPR041667 -
Lal1g0294 480 Pfam Cupin-like domain 185 339 IPR041667 -
Lal1g0294 480 PANTHER - 388 474 - -
Lal1g0294 480 PANTHER - 36 340 - -
Lal1g0294 480 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 388 474 - -
Lal1g0294 480 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 36 340 - -
Lal1g0294 480 SUPERFAMILY Clavaminate synthase-like 182 472 - -
Lal1g0294 480 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0294 Lal-Chr1 1744629 1750557 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0294 K24444 - gmx:100813075 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0294 1 1744629 1750557 Lal1g0294 1 1744629 1750557 ECH
Lal1g0294 1 1744629 1750557 Lal9g0192 9 1209500 1214346 LSH