Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal1g0288 | ATGGGAAGTTGCATTTCATCACAAGGAAAAACATACCCACGTAAAAGGTCTAAGGAACCTATCACCAAACCTTCTCCAACAAGAAACATCCAACATGATCATTATAATTATGACCCACCAACACCAACCACCGCACGCCGCTCATCGGTGGCCTCAATGCGGCCACCGATGACCGTGATAATGAGCCCTTCCCCGGGTAATATATTTGACAAGTATCAATTAGGGAAGGAGCTAGGGAGAGGAGAATTTGGTGTGACACATAGGTGTGTTGATTTGAAGAGTGGTGAGGCTTTTGCATGTAAGAAGATAGCTAAGACAAAGTTGAGAACAGAGATTGATATTGCTGATGTGAGGAGGGAGGTGCAGATCATGAGGCATTTGCCTAAACATCCTAATATTGTGTCATTTAGAGAGGCTTATGAGGATAGAGATGCTGTTTATCTTGTTATGGAGCTTTGTGAAGGTGGTGAGCTTTTTGATAGGATTGTTGCAAAGGGACATTATACCGAACGTGCTGCTGCTAATGTTACCAAGACAATACTTGAAGTTTGTAAGGTGTGCCATGACGAGGGCGTAATACACAGGGACTTAAAACCTGAAAATTTCTTATTTGCAGATGGAAGTGAGACTAGTCCCTTAAAGGCAATTGATTTTGGACTTTCCACCTTCTATGAAGCTGGGGAAAGATTCAGTGAAATTGTTGGAAGTCCCTATTACATGGCTCCAGAGGTCTTAAGACGTAACTATGGACTCGAAGTCGATGTGTGGAGCACAGGCGTTATTCTTTATATTTTACTTTGTGGAGTTCCACCCTTTTGGGCAGGCATTGCAGAAACTGAAGAAGGAATTGCACAGGCCATCATCCGCGGTAATTTAGATTTCACAAGAGATCCATGGCCTAAAGTTTCAGAAGAAGCAAAAGACATAGTTAAGCGTATGCTTGATCCAAATCCACACACCCGTGTAACAGTTCAAGAAGTTCTTGAACATTCTTGGATACAAAACAAGGATCATGCACGAAATATTTCTCTTGGAGACCAAGTAAGAATGAGAATCAAGACATTCTCCTTGATGAACAGATTCAAAAAGAAGGCTCTAAGAGTGGTGGCTGATAACCTGCCAGATGAGCAAGTTCAAGGTATAAGGAAAATGTTTGATATGATGGACAAGGACAAAAATGGGCACTTAACATTTGAAGAGCTCAAAGATGGCCTTGCAACTATCGGAGACGCTCTTCCTGATCCCGATGTTCAGATGTTAATGGAGGCTGCAGATATTGATGGAAATGGCACCCTGAATTGTGAAGAGTTTATAACAATGAGTGTTCATCTGAGAAAGATTGAAAGTGATGAGCATCTCACTGAAGCATTCAATTACTTTGACAAGAATCAAAATGGGTATATTGAGCTTGAGGAGTTGAAAGATGCCTTATCAGATGATGGTCCGGGACTTAATGACGACGAGGTGATCAGAGACATTCTAAATGATGTGGACTTGGATAAGGATGGTAAAATCAGTTTTGAGGAGTTTAAGGCAATGATGAAGTCAGGAGGAGATTGGAAAATGGCTTCTCGGCAGTATTCAAGAGCAATGCTAAATGCATTAAGCATCAAGATGTTTAAAGATAACTCTATAACTGCAGCTAACTAA | 1650 | 0.4127 | MGSCISSQGKTYPRKRSKEPITKPSPTRNIQHDHYNYDPPTPTTARRSSVASMRPPMTVIMSPSPGNIFDKYQLGKELGRGEFGVTHRCVDLKSGEAFACKKIAKTKLRTEIDIADVRREVQIMRHLPKHPNIVSFREAYEDRDAVYLVMELCEGGELFDRIVAKGHYTERAAANVTKTILEVCKVCHDEGVIHRDLKPENFLFADGSETSPLKAIDFGLSTFYEAGERFSEIVGSPYYMAPEVLRRNYGLEVDVWSTGVILYILLCGVPPFWAGIAETEEGIAQAIIRGNLDFTRDPWPKVSEEAKDIVKRMLDPNPHTRVTVQEVLEHSWIQNKDHARNISLGDQVRMRIKTFSLMNRFKKKALRVVADNLPDEQVQGIRKMFDMMDKDKNGHLTFEELKDGLATIGDALPDPDVQMLMEAADIDGNGTLNCEEFITMSVHLRKIESDEHLTEAFNYFDKNQNGYIELEELKDALSDDGPGLNDDEVIRDILNDVDLDKDGKISFEEFKAMMKSGGDWKMASRQYSRAMLNALSIKMFKDNSITAAN | 549 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal1g0288 | 549 | Gene3D | Transferase(Phosphotransferase) domain 1 | 158 | 342 | - | - | |
Lal1g0288 | 549 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
Lal1g0288 | 549 | Gene3D | - | 343 | 517 | - | - | |
Lal1g0288 | 549 | Pfam | EF-hand domain pair | 381 | 440 | IPR002048 | GO:0005509 | |
Lal1g0288 | 549 | Pfam | EF-hand domain pair | 451 | 515 | IPR002048 | GO:0005509 | |
Lal1g0288 | 549 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 485 | 520 | IPR002048 | GO:0005509 | |
Lal1g0288 | 549 | SUPERFAMILY | EF-hand | 363 | 516 | IPR011992 | - | |
Lal1g0288 | 549 | CDD | EFh | 452 | 515 | IPR002048 | GO:0005509 | |
Lal1g0288 | 549 | Gene3D | Phosphorylase Kinase; domain 1 | 74 | 157 | - | - | |
Lal1g0288 | 549 | SMART | efh_1 | 489 | 517 | IPR002048 | GO:0005509 | |
Lal1g0288 | 549 | SMART | efh_1 | 380 | 408 | IPR002048 | GO:0005509 | |
Lal1g0288 | 549 | SMART | efh_1 | 452 | 480 | IPR002048 | GO:0005509 | |
Lal1g0288 | 549 | SMART | efh_1 | 416 | 444 | IPR002048 | GO:0005509 | |
Lal1g0288 | 549 | ProSitePatterns | EF-hand calcium-binding domain. | 461 | 473 | IPR018247 | - | |
Lal1g0288 | 549 | ProSitePatterns | EF-hand calcium-binding domain. | 498 | 510 | IPR018247 | - | |
Lal1g0288 | 549 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 448 | 483 | IPR002048 | GO:0005509 | |
Lal1g0288 | 549 | SUPERFAMILY | Protein kinase-like (PK-like) | 53 | 345 | IPR011009 | - | |
Lal1g0288 | 549 | ProSitePatterns | EF-hand calcium-binding domain. | 425 | 437 | IPR018247 | - | |
Lal1g0288 | 549 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 376 | 411 | IPR002048 | GO:0005509 | |
Lal1g0288 | 549 | ProSiteProfiles | Protein kinase domain profile. | 72 | 333 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lal1g0288 | 549 | CDD | STKc_CAMK | 71 | 332 | - | - | |
Lal1g0288 | 549 | ProSitePatterns | Protein kinases ATP-binding region signature. | 78 | 101 | IPR017441 | GO:0005524 | |
Lal1g0288 | 549 | CDD | EFh | 381 | 440 | IPR002048 | GO:0005509 | |
Lal1g0288 | 549 | Pfam | Protein kinase domain | 72 | 333 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lal1g0288 | 549 | ProSitePatterns | EF-hand calcium-binding domain. | 389 | 401 | IPR018247 | - | |
Lal1g0288 | 549 | MobiDBLite | consensus disorder prediction | 23 | 51 | - | - | |
Lal1g0288 | 549 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 192 | 204 | IPR008271 | GO:0004672|GO:0006468 | |
Lal1g0288 | 549 | SMART | serkin_6 | 72 | 333 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lal1g0288 | 549 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 52 | 530 | - | - | |
Lal1g0288 | 549 | PANTHER | CALCIUM-DEPENDENT PROTEIN KINASE 24 | 52 | 530 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal1g0288 | Lal-Chr1 | 1708852 | 1712825 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal1g0288 | 1 | 543 | EF-hand Containing Proteins | AT2G31500 | 66.422 | 0.0 | 753 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Lal1g0288 | Pkinase | 5.6e-74 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal1g0288 | K13412 | - | gmx:100818929 | 870.537 |