Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0276 ATGGATATGGACAAATCCCCTGGTCATGGTGGAGGTTTCCTACCTCCCTCTGCCCGTTATTCCGGTTACTCGCCCGCTGCTGCCCCGTTTAATGTGAGATCAGAGCCATCCTCATCATATCCTCCATTGGTTGACTCTGCTAGTGCTAGTTTTATTCATGATATTAGCAGAATGCCTGATAATCCCCCAAGAAATAGAGGTCATCGACGCGCTCATTCAGAGATTATCACCCTACCCGATGATCTTAGCTTTGACAGTGACCTTGGTGTAGTTGGAGGCGCTGATGGGCCATCGTTCTCTGATGAGACAGAGGAAGACTTACTGTCCATGTACCTTGATATGGATAAATTCATTTCATCATCCGCTACATCGCCTTTCCAAATTGGTGAGTCATCAACTGCTGCTGCAGCACCAACTTCAAGAGCCCCTGCCTCTTCCGCTGATGACATCGTTGTTGGTACTAATCAAAGGCCCAGAGTTAGGCACCAACATAGCCAGTCCATGGATGGGTCAACAACCATCAAACCTGAGATGCTTGTCTCAGGTTCGGAAGACATCCCTGGAGCTGATGCCAAAAAATCATTGTCAGCTGCCAAGCTTGCCGAACTCGCTTTAGTTGATCCTAAGCGTGCTAAAAGGATATGGGCAAATAGGCAATCTGCCGCGAGGTCAAAAGAAAGGAAGATGCGCTACATTTCCGAGCTTGAAAGGAAGGTGCACACATTGCAAACAGAAGCTACATCCTTGTCTGCACAATTAACTCTCTTGCAGAGAGATACAACTGGAGTATCTGGTGAGAACAGTGAGTTGAAATTGAGGTTGCAAACCATGGAGCAACAAGTTCACTTGCAAGATGCATTAAACGATGCATTAAAAGAGGAAATTCAGCATTTGAAAGTATTGACTGGGCAAGGTATATCAAATGGAGGACCTATGAACTTTGCCTCATATGGAGTGGGGCAACAATTCTATCCCAACAACAATCAGGGCATGCACACTCTTTTAGCTGCCCAACAGCTTCAACAACTTCAAATTCATTCCCACAAAAAGCAGCAGCAGCAACAACAGATCTTACAGCATCAACTTCAACAGCAACATCAGTTTCAACAGCATCAACTGCAACAGCAACAACCACCACAACATCCACAGCAGCAGCAGCAGCAGCCACAACACCAACAGCAGCAGCAGCAGCCACAACACCAACAGCAGCAGCCGCAACAGGAACAGTAG 1230 0.4675 MDMDKSPGHGGGFLPPSARYSGYSPAAAPFNVRSEPSSSYPPLVDSASASFIHDISRMPDNPPRNRGHRRAHSEIITLPDDLSFDSDLGVVGGADGPSFSDETEEDLLSMYLDMDKFISSSATSPFQIGESSTAAAAPTSRAPASSADDIVVGTNQRPRVRHQHSQSMDGSTTIKPEMLVSGSEDIPGADAKKSLSAAKLAELALVDPKRAKRIWANRQSAARSKERKMRYISELERKVHTLQTEATSLSAQLTLLQRDTTGVSGENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKVLTGQGISNGGPMNFASYGVGQQFYPNNNQGMHTLLAAQQLQQLQIHSHKKQQQQQQILQHQLQQQHQFQQHQLQQQQPPQHPQQQQQQPQHQQQQQQPQHQQQQPQQEQ 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0276 409 Coils Coil 274 294 - -
Lal1g0276 409 Coils Coil 225 252 - -
Lal1g0276 409 MobiDBLite consensus disorder prediction 158 173 - -
Lal1g0276 409 MobiDBLite consensus disorder prediction 364 409 - -
Lal1g0276 409 MobiDBLite consensus disorder prediction 129 173 - -
Lal1g0276 409 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 382 - -
Lal1g0276 409 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 382 - -
Lal1g0276 409 Pfam bZIP transcription factor 209 257 IPR004827 GO:0003700|GO:0006355
Lal1g0276 409 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 207 270 IPR004827 GO:0003700|GO:0006355
Lal1g0276 409 SMART brlzneu 205 269 IPR004827 GO:0003700|GO:0006355
Lal1g0276 409 CDD bZIP_plant_RF2 210 259 IPR044759 GO:0003700|GO:0006355
Lal1g0276 409 Gene3D - 208 260 - -
Lal1g0276 409 SUPERFAMILY Leucine zipper domain 209 260 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0276 Lal-Chr1 1621817 1625191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0276 19 337 bZIP Transcription Factor Family AT1G06070 72.171 2.51e-164 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal1g0276 bZIP_1 6.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0276 - - mnt:21399192 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0276 1 1621817 1625191 Lal9g0182 9 1135633 1140100 LSH
Lal25g0364 25 2468748 2474710 Lal1g0276 1 1621817 1625191 PCT
Lal10g1072 10 17696421 17700076 Lal1g0276 1 1621817 1625191 PCT
Lal8g0306 8 2052761 2055830 Lal1g0276 1 1621817 1625191 PCT
Lal1g0276 1 1621817 1625191 Lal25g0364 25 2468748 2474710 PCT
Lal1g0276 1 1621817 1625191 Lal10g1072 10 17696421 17700076 PCT
Lal1g0276 1 1621817 1625191 Lal8g0306 8 2052761 2055830 PCT