Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0213 ATGTCAGATGTTGAAGCACCTAAGAAGGAAAAGGCTCCTCCACCTTCCTCCAAGCCAGCAAAATCTGGCGGTGGAAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACATGGTTCTGTTTGATCAGGCCTCTTATGACAAGCTACTCTCTGAAGCACCCAAGTTCAAGCTTATCACTCCTTCCATCCTTTCTGACCGTTTGAGGATTAACGGGTCTCTTGCAAGGAAGGCTATCAGAGACTTGATGGCTAGAGGTTCAATCAGGATGGTTTCTGCTCACTCAAGTCAGCAAATATACACTAGGGCGACAAATACCTAG 339 0.4631 MSDVEAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLITPSILSDRLRINGSLARKAIRDLMARGSIRMVSAHSSQQIYTRATNT 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0213 112 MobiDBLite consensus disorder prediction 1 40 - -
Lal1g0213 112 Pfam S25 ribosomal protein 11 109 IPR004977 -
Lal1g0213 112 PANTHER 40S RIBOSOMAL PROTEIN S25 4 112 IPR004977 -
Lal1g0213 112 Gene3D - 25 112 - -
Lal1g0213 112 MobiDBLite consensus disorder prediction 1 15 - -
Lal1g0213 112 PANTHER BNAA04G12260D PROTEIN 4 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0213 Lal-Chr1 1277662 1279821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0213 6 111 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 92.453 2.78e-54 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0213 K02975 - fve:101301719 156.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0213 1 1277662 1279821 Lal9g0152 9 963383 965060 LSH