Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0210 ATGTCAGGCCCTCTCGATCGTTTCGCTAGACCCTGCTTTGAGGGGTTTTACGGCAGTGATGAGAAAAAGGAAAGGAGATCCGATTTTGAGAACTCTGAGGATGAAAGGAGGACAAAGATTGGTTCTTTAAAAAAGAAAGCTCTTAATGCATCTTCCAAATTCAAGCATTCTCTAAAGAAGAAGAGTAGCCGGAGGAAAAGCGACGGCCGTGTTAGCTCTGTTTCCATTGAGGATGTTCGGGATGTCGAGGAACTGCAGGCTGTTGATGCATTTCGTCAATCGTTGATTATGGATGAATTGCTTCCAGAAAAACATGATGATTACCATATGATGTTAAGATTTCTGAAAGCAAGAAAGTTTGATATTGAAAAGGCAAAGCATATGTGGGCTGATATGCTACAATGGAGGAAGGAGTTTGGTGCCGACACTATTTTGGAGGATTTTGAGTTCAAAGAGATAGATGAAGTTTTAAAGCATTATCCGCAAGGCTATCATGGTGTTGATAAGGAGGGCAGACCTGTTTACATTGAAAGACTTGGAAAAGTAGATACAAACAAACTGATGCATGTTACAACTATGGATAGATATGTAAAGTACCACGTACAGGAGTTTGAGAAAACTTTTGCGGTAAAGTTTCCTGCTTGCGCAATAGCTGCCAAACGGCACATAGACTCAAGCACCACAATCTTAGATGTTCAAGGCGTGGGCCTTAAGAACTTTTCAAAGTCTGCACGGGAACTACTCATGCGTATACAGAAGATTGATGGTGACAATTACCCTGAGACACTGTGCCAAATGTTTCTCATAAATGGTGGCCCGGGATTTAGATTGCTTTGGAACACTGTCAAGTCTTTTCTTGATCCAAAAACAGCTTCAAAGATTCATTTTCTCGGAACCAAGTACCAAAGCAAATTGCTCGAAATAGTTGATGCCAGTGAGTTGCCAGAATTTTTGGGAGGTACCTGCACTTGTGCGGATCATGGAGGTTGTCTCAGATCTGATAAAGGGCCATGGAAAAACCCTGAAATATTGAAGATGATTCTGAGTGGTGAAGCACGGCGCCCAAGGCAGGTAGTAAAAGTTCTAAACAGTGACGGAAAGGTTATTGCCTATGCCAAACCACGATACCCGATGGTAAAAGGCAGTGATACATCCACAACTGAATCAGGGTCCGAAGCTGAAGATATAGCTTCTCCAAAAGCGGTGCATAATTACTCGCACCTTAGGTTGACTCCTGTTCGTGAGGAAGCTAAGGTAGTTGGAAAGTCAAGCTATGCTGCTAGTGGCAACCTATCTGGGTATGATGAATATGTTCCAATGGTGGACAAAGCTGTTGATGCTGTTTGGAAGAAGCAAGCTTCACTCCAGAGCGCCAAAGGGCTTTTATGTGACCGGTTTGTTAGGGTTACAAATAAGTACTCAAATACTGGCTGTGTTCCTAAAAACTTAACTTATGGGAGGCCTGGAATACCTCCCCTTCTTGACACTCCAAAAATTCCAGATGGGATTCGAGCTCGGATCTGGGTAGCCCTGACTGTCTTCGTTTTGACTCTATTTACTCTCTTCCGTTCATTCACAAGCCGTGTGACCAAGACGCCTCCCGCCATATCATCTAATGATTGCCCGGGCCCTTCCGAGTCAACTTCTGATGCAACAAACAAGGAAGATGGCCATCCTCCTTTACCAACTCCAGCACATACTGAGGCGGATCTCCTTTCCTCCATGATGAAAAGGTTAAATGAGCTTGAAGAGAAGGTTGACACACTCCAATCTAAGCCATCTGAGATGCCTAATGAGAAAGCAGAATTGCTAAATGCTGCTGTCTGCCGAGTGGATGCTTTGGAGGCAGAGTTAATTGCAACTAAAAAGGCTCTCTATGAAGCCTTAATGAGGCAAGAAGAGCTGCTTGCTTATATTGATAGGCAAGAAGAAGCTAAATTTCGGAAGAAGAAGAAGTTGTTTTGCTGGTAG 1971 0.4348 MSGPLDRFARPCFEGFYGSDEKKERRSDFENSEDERRTKIGSLKKKALNASSKFKHSLKKKSSRRKSDGRVSSVSIEDVRDVEELQAVDAFRQSLIMDELLPEKHDDYHMMLRFLKARKFDIEKAKHMWADMLQWRKEFGADTILEDFEFKEIDEVLKHYPQGYHGVDKEGRPVYIERLGKVDTNKLMHVTTMDRYVKYHVQEFEKTFAVKFPACAIAAKRHIDSSTTILDVQGVGLKNFSKSARELLMRIQKIDGDNYPETLCQMFLINGGPGFRLLWNTVKSFLDPKTASKIHFLGTKYQSKLLEIVDASELPEFLGGTCTCADHGGCLRSDKGPWKNPEILKMILSGEARRPRQVVKVLNSDGKVIAYAKPRYPMVKGSDTSTTESGSEAEDIASPKAVHNYSHLRLTPVREEAKVVGKSSYAASGNLSGYDEYVPMVDKAVDAVWKKQASLQSAKGLLCDRFVRVTNKYSNTGCVPKNLTYGRPGIPPLLDTPKIPDGIRARIWVALTVFVLTLFTLFRSFTSRVTKTPPAISSNDCPGPSESTSDATNKEDGHPPLPTPAHTEADLLSSMMKRLNELEEKVDTLQSKPSEMPNEKAELLNAAVCRVDALEAELIATKKALYEALMRQEELLAYIDRQEEAKFRKKKKLFCW 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0210 656 MobiDBLite consensus disorder prediction 531 567 - -
Lal1g0210 656 Coils Coil 572 592 - -
Lal1g0210 656 MobiDBLite consensus disorder prediction 531 550 - -
Lal1g0210 656 PRINTS Cellular retinaldehyde-binding protein signature 110 132 - -
Lal1g0210 656 PRINTS Cellular retinaldehyde-binding protein signature 279 298 - -
Lal1g0210 656 PRINTS Cellular retinaldehyde-binding protein signature 312 321 - -
Lal1g0210 656 SUPERFAMILY CRAL/TRIO N-terminal domain 82 148 IPR036273 -
Lal1g0210 656 Pfam CRAL/TRIO, N-terminal domain 104 131 IPR011074 -
Lal1g0210 656 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 152 326 IPR001251 -
Lal1g0210 656 MobiDBLite consensus disorder prediction 49 66 - -
Lal1g0210 656 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 3 654 - -
Lal1g0210 656 SMART sec14_4 152 323 IPR001251 -
Lal1g0210 656 SMART CRAL_TRIO_N_2 107 132 IPR011074 -
Lal1g0210 656 CDD SEC14 153 321 IPR001251 -
Lal1g0210 656 MobiDBLite consensus disorder prediction 20 42 - -
Lal1g0210 656 Gene3D - 140 350 IPR036865 -
Lal1g0210 656 Pfam CRAL/TRIO domain 158 320 IPR001251 -
Lal1g0210 656 MobiDBLite consensus disorder prediction 20 70 - -
Lal1g0210 656 SUPERFAMILY CRAL/TRIO domain 152 345 IPR036865 -
Lal1g0210 656 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH8 3 654 - -
Lal1g0210 656 Gene3D - 16 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0210 Lal-Chr1 1259944 1265390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0210 86 317 Acyl Lipid Metabolism Gene Families AT5G47730 29.218 7.42e-20 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0210 - - lang:109351490 1000.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0210 1 1259944 1265390 Lal2g0131 2 801166 810380 LSH