Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0209 ATGGCTTCTTCAAGTGGAACATCGTCAGGGTCATCACTGCTTCAGAACTCAGGTTCAGAGGAGAACCTTGTGTCTTTGATGGATCAGAGGAAAAGGAAGAGGATGTTATCAAACCGTGAATCAGCAAGGAGATCTCGAATGAGGAAACAGAAGCACTTGGATGATCTGGTTTCACAAGTGGATCAACTCAGGAAGGAGAATCATCAGATACTCAAAACTCTCAACATCACAACACAACAGTACTTGAGTGTTGAGGCTGAAAACTCAGTTCTGAGGGCTCAGGTTGGAGAACTAAGTCATAGGTTGGAGTCCTTGAATGAGATTATTGACTTCTTGAATGCGAGAACTGGTGTTTTTGGAGCTCCAGCTGCATCAGGGAACTTCAATATTGAGCCAAGTGATAACTTCTTTAACCCAATGAACATGGCCTATATGCACCAACCCATTATTGCTTCTTCGGAAATGTTGCAGTACTGA 477 0.4319 MASSSGTSSGSSLLQNSGSEENLVSLMDQRKRKRMLSNRESARRSRMRKQKHLDDLVSQVDQLRKENHQILKTLNITTQQYLSVEAENSVLRAQVGELSHRLESLNEIIDFLNARTGVFGAPAASGNFNIEPSDNFFNPMNMAYMHQPIIASSEMLQY 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0209 158 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Lal1g0209 158 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Lal1g0209 158 Pfam bZIP transcription factor 30 81 IPR004827 GO:0003700|GO:0006355
Lal1g0209 158 MobiDBLite consensus disorder prediction 1 24 - -
Lal1g0209 158 Coils Coil 95 115 - -
Lal1g0209 158 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Lal1g0209 158 Coils Coil 46 73 - -
Lal1g0209 158 MobiDBLite consensus disorder prediction 1 53 - -
Lal1g0209 158 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 156 - -
Lal1g0209 158 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Lal1g0209 158 Gene3D - 28 83 - -
Lal1g0209 158 SUPERFAMILY Leucine zipper domain 30 82 IPR046347 GO:0003700|GO:0006355
Lal1g0209 158 MobiDBLite consensus disorder prediction 25 53 - -
Lal1g0209 158 PANTHER BZIP TRANSCRIPTION FACTOR 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0209 Lal-Chr1 1253985 1254461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0209 25 158 bZIP Transcription Factor Family AT4G34590 58.451 1.63e-50 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal1g0209 bZIP_1 3.2e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0209 K25786 - gmx:100101862 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0209 1 1253985 1254461 Lal1g0209 1 1253985 1254461 ECH
Lal1g0209 1 1253985 1254461 Lal9g0146 9 939200 939682 LSH