Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0208 ATGAAGGACGCAGATGTATCGAAACAGATCCAACAGATGATTAGGTTCATCCGCCAAGAGGCAGAGGAGAAAGCTAATGAAATATCTGTTGCTGCCGAAGAGGAATTCAATATTGAGAAACTACAATTACTTGAAGCAGAAAAGAGAAAGATCAGACAAGAGTACGAGCGAAAAGCCAAACAAGTTGACGTTCGTAAAAAAATTGAATACTCAATGCAGCTGAATGCAGCCCGATTAAAAGTACTTCAAGCACAAGATGAAATGGTGAATTCTATGAAAGATGATGCTAAAAAAGCGCTTTTACGTGTCTCTAATGATAAGAAAGCATATAAGAAACTCATCAAAGACATAATTGTTCAGGGTTTAATTCGGATGAGGGAACCATCAGTGATATTACGGTGCAGAGAGGGAGATCGTAAGCTAATAGAATCAGTGCTAGAAGAGGCCAAAAAAGAATATTCAGAGAAAGCCAATGTTCAAGGCCCTACAATTATACTTGATAATCGTGTTTTCCTCCCTTCACCACCTAAAAACAACTCCACCGATTCCATTGAACCTTTTTGGTACTATCTCCCATCAACTCTTTCATATAATAATTACTAG 603 0.3798 MKDADVSKQIQQMIRFIRQEAEEKANEISVAAEEEFNIEKLQLLEAEKRKIRQEYERKAKQVDVRKKIEYSMQLNAARLKVLQAQDEMVNSMKDDAKKALLRVSNDKKAYKKLIKDIIVQGLIRMREPSVILRCREGDRKLIESVLEEAKKEYSEKANVQGPTIILDNRVFLPSPPKNNSTDSIEPFWYYLPSTLSYNNY 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0208 200 Coils Coil 38 61 - -
Lal1g0208 200 Pfam ATP synthase (E/31 kDa) subunit 16 172 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lal1g0208 200 Gene3D - 91 183 IPR038495 -
Lal1g0208 200 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 177 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lal1g0208 200 PANTHER BNAC03G72900D PROTEIN 1 177 - -
Lal1g0208 200 SUPERFAMILY V-type ATPase subunit E-like 87 161 - -
Lal1g0208 200 Coils Coil 7 34 - -
Lal1g0208 200 Gene3D - 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0208 Lal-Chr1 1243987 1245658 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0208 1 185 Primary Pumps ATPases(2) AT4G11150 67.568 2.17e-89 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0208 K02150 - gmx:100791813 305.449