Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0206 ATGAGTATTCGTGTTGAATGTTATATCCTGTTTTCTGTTATCCTCATTTGGCTAACTGCATGTTCTTCATCATTTAGCGACATGGATGTGCTTCTGAAGGTGAAAGAATCCATGAAGGGAAGAGATTCCAAAGGTGACGCACTTCAAGACTGGAAGTATTCTATCTCTATTTCTGCACACTGTTCATTCTCAGGTGTTAAATGTGACCAAAATCTCAGAGTCATTTCACTTAATATATCCTTCATTCCCCTCTATGGTTCTATTCCTTCAGAGATTGGACTTTTGGACAAGCTTGTGAATCTAACCATCTCTCAGGATAATCTCACTGGTGAGCTACCAAAAGAGCTTGCTAACCTCACTTCACTCAGACTCCTCAACATCTCTCACAACGTCTTCTTAGGTCACTTTCCTGGTGAAGTCACTCTTTCAATGCCTCAGCTTGAGGCCCTTGATGCTTATGATAACAACTTCACAGGACCTTTACCTGAGGAAATGGTTAAACTGAAGAAACTCAAGTTTCTTCACCTCGGTGGTAACTATTTCTCAGGGGAGATACCAGAGAGTTACTCCGAGTTTCAGAGCTTGGAGTATTTAAGCTTAACTGCGAACTGCTTAACTGGTAAGATACCAAAGAGTTTGGGTATGTTGAAGACGCTGAAGGAGCTTTATTTAGGTTATAACAATGCATATGAAGGTGGAATCCCTGAAGAGCTTGGTTTCATTCAAAATTTGCAGCTTCTTGATTTAGCTAGCTGCAACTTGAGCGGTGAGATTCCATCGAGTTTGGGAGCGTTGACGAATTTACACACTTTGTTCTTGCAAATGAACAATCTCAGAGGTGCTATTCCGACGGAGCTCTCTTCCATGATCAGCCTCATGTCGCTGGATCTCTCCATCAACGACTTCATCGGAGAGATACCGGAAACTTTCTCTCAGCTCAAAAACCTCACTCTTATAAGTTTCTTCCAGAACAAGCTTTGCGGCTCAATTCCTGAATTCGTTGGAGAACTTCCGAACCTGGAAACGTTTCAGATTTGGGACAACAACTTCTCTTATGTGCTTCCCTCAAACCTTGGTCAGAATGGAAAGTTTAAGTACTTTGATGTCACGAGGAATCACCTCACCGGTTTGATTCCCAAGGATTTGTGTAAAGGAGGAAGGCTAAAAACATTTATCTTCACTAACAATTTCTTCCATGGTCCTATTCCTGAAGAAATTGGGAACTGTAAGTCTTTGCTCAAGATTCGAGTTTCCAATAACTTCCTCAACGGACCAGTTCCTGCAGGGATCTTCAAACTACCTTATGTCAACATCATGGAGTTCGACAATAACCGTTTTAACGGTGAACTACCTTCCGACATTTCTGGCGATTCTCTCTGGATCCTCACACTCTCCAACAATTTGTTCACTGGGAAAATTCCTCCAACGTTGAAGAACCTCAAAAGCGTGCAGACTCTATCGCTAAACACGAATCAGTTCATTGGTGAAATCCCAGGGGAAGTGTTTGAGTTACCAGTGTTGACGAAGATCAACGTGAGTGGCAACAACCTCACCGGGCCAATCCCAATTGAAATGACTCGTTGTGTTTCGTTAACCGCGGTTGATCTTAGCCGGAACATGTTAGTTGGAGAGGTTCCGAAAGGGATTCAGAATCTTATAGACTTAAGCATTTTGAATCTATCAGTAAATGATATATCGGGTCCAATTCCCGATGAAATTCGATTCATGACGAGTCTCACAACCCTAGATCTCTCCAACAACAACTTCATAGGTAGAATTCCCTCTGGTGGTCAATTTCTGGCCTTCGACAATAGTTCATTTTTTGGAAACCCTAACCTATGTTCAGCTCATCAACTCTCTTGCCCTTCGTTGGTGTACTTAAACGACAACGTTCATAATAGCCATAGTTCTAAATCAACTAAGAACATTATCATTGTGATTACTCTTGCCACGACGGTGTTACTTGTTTTCGTAACAGTATACACGATGAGGAAGAGAAAGATTCGAAATTCAATGTCTTGGAATTTAACGGCGTTTCAAAAGCTTGATTTTGAAGCGGAAGAGGTAGTTGAATGCTTGAAGGAAGAGAACATAATAGGGAAAGGAGAAGCAGGGATCGTGTACCGCGGGTCCATGGCAAACGGAACTGACGTGGCAATAAAGCGTTTGGTGAGTCAAGGAAGTGGAAGCAACGATTATGGATTCAAAGCGGAGATTGAAACACTTGGGAAGATAAGGCATAGGAACATAATGAAGCTTCTAGGGTATGTCTCCAATAAGGACACAAATTTATTATTGTATGAGTATATGGCTAATGGGAGTTTGGAGGAGTGGCTGCATGGTTCAAAAGGAGGGCATTTGACGTGGGAAATGAGGTATAGGATTGCTGTTGAAGCAGCTAAGGGATTGTGTTATTTGCACCATGATTGTTCACCTCTCATTATTCATAGAGATGTTAAATCCAATAATATATTGTTGGATGGAGACTTTGAGGCACATGTTGCTGATTTTGGACTTGCCAAGTTCTTGCATGATCATGGAGCTTCTCAGTCCAAGTCCTTTACCGTTGGCTCCTATGGCTACATTGCTCCAGAGTTTGATTACACACTGAAAGTAGACGAGAAAAGCGATGTGTATAGTTTCGGCATAGTGATGTTGGAGCTGATAGTAGGAAGAAAGCCAGTGAGTGAGTTTGGAGATGGAATAGACATCGTTGGATGGATCAAGAAAACAACATCAGAACTCTGTCAGCCGTCAGATACAGCATCAGTGTTAGCAGTGGTGGACCCCAGGATCATTCATTACCCTTTGACAAGTGTAATCCATATGTTCAATATAGCTATGATGTGTGTTAAAGAAATGGGACCCACAAGGCCTACAATGAGAGAAGTTGTTCATATGCTCACAAATCCTCCCCACTCTATTGCTCACAACCTAATAAATCTATAG 2949 0.4188 MSIRVECYILFSVILIWLTACSSSFSDMDVLLKVKESMKGRDSKGDALQDWKYSISISAHCSFSGVKCDQNLRVISLNISFIPLYGSIPSEIGLLDKLVNLTISQDNLTGELPKELANLTSLRLLNISHNVFLGHFPGEVTLSMPQLEALDAYDNNFTGPLPEEMVKLKKLKFLHLGGNYFSGEIPESYSEFQSLEYLSLTANCLTGKIPKSLGMLKTLKELYLGYNNAYEGGIPEELGFIQNLQLLDLASCNLSGEIPSSLGALTNLHTLFLQMNNLRGAIPTELSSMISLMSLDLSINDFIGEIPETFSQLKNLTLISFFQNKLCGSIPEFVGELPNLETFQIWDNNFSYVLPSNLGQNGKFKYFDVTRNHLTGLIPKDLCKGGRLKTFIFTNNFFHGPIPEEIGNCKSLLKIRVSNNFLNGPVPAGIFKLPYVNIMEFDNNRFNGELPSDISGDSLWILTLSNNLFTGKIPPTLKNLKSVQTLSLNTNQFIGEIPGEVFELPVLTKINVSGNNLTGPIPIEMTRCVSLTAVDLSRNMLVGEVPKGIQNLIDLSILNLSVNDISGPIPDEIRFMTSLTTLDLSNNNFIGRIPSGGQFLAFDNSSFFGNPNLCSAHQLSCPSLVYLNDNVHNSHSSKSTKNIIIVITLATTVLLVFVTVYTMRKRKIRNSMSWNLTAFQKLDFEAEEVVECLKEENIIGKGEAGIVYRGSMANGTDVAIKRLVSQGSGSNDYGFKAEIETLGKIRHRNIMKLLGYVSNKDTNLLLYEYMANGSLEEWLHGSKGGHLTWEMRYRIAVEAAKGLCYLHHDCSPLIIHRDVKSNNILLDGDFEAHVADFGLAKFLHDHGASQSKSFTVGSYGYIAPEFDYTLKVDEKSDVYSFGIVMLELIVGRKPVSEFGDGIDIVGWIKKTTSELCQPSDTASVLAVVDPRIIHYPLTSVIHMFNIAMMCVKEMGPTRPTMREVVHMLTNPPHSIAHNLINL 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0206 982 Gene3D Ribonuclease Inhibitor 26 141 IPR032675 -
Lal1g0206 982 PANTHER UNNAMED PRODUCT 7 975 - -
Lal1g0206 982 Gene3D Transferase(Phosphotransferase) domain 1 770 978 - -
Lal1g0206 982 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Lal1g0206 982 PANTHER RECEPTOR PROTEIN KINASE CLAVATA1 7 975 - -
Lal1g0206 982 SUPERFAMILY RNI-like 76 399 - -
Lal1g0206 982 SUPERFAMILY Protein kinase-like (PK-like) 674 968 IPR011009 -
Lal1g0206 982 Pfam Protein tyrosine and serine/threonine kinase 694 968 IPR001245 GO:0004672|GO:0006468
Lal1g0206 982 Pfam Leucine rich repeat N-terminal domain 26 69 IPR013210 -
Lal1g0206 982 SMART serkin_6 693 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0206 982 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Lal1g0206 982 SMART LRR_typ_2 576 599 IPR003591 -
Lal1g0206 982 SMART LRR_typ_2 480 504 IPR003591 -
Lal1g0206 982 SMART LRR_typ_2 265 289 IPR003591 -
Lal1g0206 982 SMART LRR_typ_2 337 361 IPR003591 -
Lal1g0206 982 Gene3D Ribonuclease Inhibitor 232 334 IPR032675 -
Lal1g0206 982 Gene3D Ribonuclease Inhibitor 336 623 IPR032675 -
Lal1g0206 982 ProSiteProfiles Protein kinase domain profile. 693 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0206 982 SUPERFAMILY L domain-like 330 633 - -
Lal1g0206 982 Gene3D Ribonuclease Inhibitor 142 231 IPR032675 -
Lal1g0206 982 Pfam Leucine Rich Repeat 578 595 IPR001611 GO:0005515
Lal1g0206 982 Pfam Leucine Rich Repeat 243 265 IPR001611 GO:0005515
Lal1g0206 982 Gene3D Phosphorylase Kinase; domain 1 658 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0206 Lal-Chr1 1231951 1235661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0206 24 980 Receptor kinase-like Gene Family AT1G75820 61.587 0.0 1202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal1g0206 PK_Tyr_Ser-Thr 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0206 K00924 - gmx:732625 1445.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0206 1 1231951 1235661 Lal2g0128 2 783247 786198 LSH