Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0195 ATGGCAGCATTTGGGTCCAGCTTGAAAGAAGGGCAAGGGGAATTCATGGGAGTTTTGCAAGAATTTTCTAAGTTGTTTGGAGCTTTCAACACTGCAGATTTTATTCCATGGTTGGGTTGGCTTCATGCACGAGAGTTTAACAAAAGAATGACCAATGCAAGAAAAGCACTTGATGTTTTTATTGATAAGATCATTGATGAACACATGGCAAAGAGGAATAACAAGATGAATATGGTTGATGAGCTTATGGTTTTTCTTAAAGAAGGAGAGGCGTGGGCCATTGGTCGTGACAAAAGCGCGTGGGATGACCCTGTTACATTCAAGCCTTCAAGGTTCTTGAATGATGGAATGCCAGATTTCAAAGGAAGTGATTTTGAGTTCATTCCGTTTGGGTCAGGTCGAAGATCATGCCCAGGAATGCAACTTGGTCTATATGCTGTTGAGATGAGTGTGGCTCATTTGCTTCATTGTTTTAATTGGGAGTTACCAAATGGAATGAAACATAGTGACCTTGATATGAATGATGTCTTTGGTCTTACTGCTCCAAGGGCTCTTCAACTTGTTGTTGTTCCTAGTTATCGCTTGAATTGTTCCATTTATGACTCTTAA 609 0.4039 MAAFGSSLKEGQGEFMGVLQEFSKLFGAFNTADFIPWLGWLHAREFNKRMTNARKALDVFIDKIIDEHMAKRNNKMNMVDELMVFLKEGEAWAIGRDKSAWDDPVTFKPSRFLNDGMPDFKGSDFEFIPFGSGRRSCPGMQLGLYAVEMSVAHLLHCFNWELPNGMKHSDLDMNDVFGLTAPRALQLVVVPSYRLNCSIYDS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0195 202 PRINTS E-class P450 group I signature 90 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal1g0195 202 PRINTS E-class P450 group I signature 127 137 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal1g0195 202 PRINTS E-class P450 group I signature 137 160 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal1g0195 202 Gene3D Cytochrome P450 91 187 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal1g0195 202 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 130 139 IPR017972 GO:0005506|GO:0016705
Lal1g0195 202 Pfam Cytochrome P450 91 183 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal1g0195 202 Gene3D Cytochrome P450 1 90 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal1g0195 202 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 90 199 - -
Lal1g0195 202 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 2 88 - -
Lal1g0195 202 PANTHER CYTOCHROME P450 84A1-RELATED 90 199 - -
Lal1g0195 202 PANTHER CYTOCHROME P450 84A1-RELATED 2 88 - -
Lal1g0195 202 SUPERFAMILY Cytochrome P450 3 193 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0195 Lal-Chr1 1165544 1166811 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0195 2 75 Monolignol Biosynthesis Gene Families AT4G36220 62.162 1.17e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0195 K09755 - mtr:MTR_4g057645 201.83