Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0186 ATGGCCATTAGAAAATCAAACAAGCTTCACCAAAATGCACTAGTTTTGAAACAAATCCTCAAGAGGTGTTCAAGCTTAGGAAAGAAACATGGTTATGATGATTATGGTCTCCCTCTTGATGTCCCAAAAGGCCACTTTGCTGTTTATGTTGGTGAAAATAGAAGTAGGTATATTGTTCCTATCTCATTATTGGCTCACCCTGAGTTCCAATCTCTCCTTAGACAAGCTGAAGAAGAATTTGGCTTTGATCATGATATGGGTATCACTATTCCTTGTGAAGAAGTTGTTTTCAGATCTCTAACTTCATCAATGATCAGATGA 321 0.3738 MAIRKSNKLHQNALVLKQILKRCSSLGKKHGYDDYGLPLDVPKGHFAVYVGENRSRYIVPISLLAHPEFQSLLRQAEEEFGFDHDMGITIPCEEVVFRSLTSSMIR 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0186 106 Pfam Auxin responsive protein 35 103 IPR003676 GO:0009733
Lal1g0186 106 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 10 106 IPR003676 GO:0009733
Lal1g0186 106 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 10 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0186 Lal-Chr1 1124795 1125115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0186 38 100 Calmodulin-binding Proteins AT3G43120 53.968 1.17e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0186 K14488 - gmx:100500265 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0186 1 1124795 1125115 Lal1g0186 1 1124795 1125115 ECH
Lal1g0186 1 1124795 1125115 Lal15g1507 15 17201197 17201502 ECH
Lal1g0186 1 1124795 1125115 Lal23g1461 23 14967820 14969256 ECH
Lal1g0186 1 1124795 1125115 Lal2g0108 2 667944 668264 LSH