Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0182 ATGGGTTTTCGTTTAGCAAGCATTAGAAGGGCTTCATATACTGGAAACCAAGCATCTTCAAAAGTTGTTGATGTTCCAAAGGGCTACATAGCAGTGTACATTGGGGAGAAAGTGAAGCGGTTTGTGATCCCAATATCATACTTGAACCAACCTTTATTTCAAGTTTTACTTAATCAAGCCGAGGAAGAATTTGGATATGATCATCCAATGGGTGGCCTTACAATCCCTTGTAGCGAAGATATCTTCCTAGATATCACCTCCCACTTGCATAGATCTTAA 279 0.3978 MGFRLASIRRASYTGNQASSKVVDVPKGYIAVYIGEKVKRFVIPISYLNQPLFQVLLNQAEEEFGYDHPMGGLTIPCSEDIFLDITSHLHRS 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0182 92 Pfam Auxin responsive protein 16 87 IPR003676 GO:0009733
Lal1g0182 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Lal1g0182 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0182 Lal-Chr1 1111792 1112070 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0182 5 82 Calmodulin-binding Proteins AT3G43120 47.436 1.83e-21 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0182 K14488 - gmx:100806671 149.828
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0182 1 1111792 1112070 Lal1g0182 1 1111792 1112070 ECH