Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0181 ATGGGTTTTCATTTCCCAAGTATCAGAAGGGCATCATTTACTTCAAACCAAGCATCTACAAAAGTTGTGAATGTGCCAAAGGGCTATATAGCAGTATATGTTGGAGAGAACACAAAGCGATTCGTGATCCCAATATCATACTTGAACCAACCGTCATTTCAAGATTTACTTGATCAAGCTGAGGAAGAATTTGGATATGACCATCCAATGGGTGGCCTAACAATTCCTTGTAGAGAAGATCCCTCTTCAAAAGGACATATACTTGCATCATTTTGTACAACCCAAGCAACTTCCAAGGGAGTTGAAGTACCAAAAGGACATCTTGCAATCTATGTTGGAGAACGAATGAGTCGGTTCGTGATTCCTATATCATACTTGAGTCATGCTTCATTTCAAGAATTACTAAGTCAAGCTAAAGAAGAATTTGAATATGATCACCCAACAGGTGGTCTAATAATTCCATGCAAAGAGGATGAGTAG 480 0.3875 MGFHFPSIRRASFTSNQASTKVVNVPKGYIAVYVGENTKRFVIPISYLNQPSFQDLLDQAEEEFGYDHPMGGLTIPCREDPSSKGHILASFCTTQATSKGVEVPKGHLAIYVGERMSRFVIPISYLSHASFQELLSQAKEEFEYDHPTGGLIIPCKEDE 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0181 159 Pfam Auxin responsive protein 11 79 IPR003676 GO:0009733
Lal1g0181 159 Pfam Auxin responsive protein 95 157 IPR003676 GO:0009733
Lal1g0181 159 PANTHER AUXIN-INDUCED PROTEIN 10A5 89 159 - -
Lal1g0181 159 PANTHER AUXIN-INDUCED PROTEIN 10A5 8 80 - -
Lal1g0181 159 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 8 80 IPR003676 GO:0009733
Lal1g0181 159 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 89 159 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0181 Lal-Chr1 1110018 1113071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0181 14 77 Calmodulin-binding Proteins AT3G43120 51.562 1.69e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0181 - K14488 aip:110269930 207.608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0181 1 1110018 1113071 Lal1g0181 1 1110018 1113071 ECH