Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0180 ATGGGTTTCCGTTTACCTGCTATTCGAAGGGCATCATTCAGTGGTAGCCAAACATCTTCAAAATGCGTGGAAGTGCCAAAGGGGTATCTTGCAGTGTATGTTGGAGAGAAGCATAAACGGTTTGTCATCCCAATATCATACTTGAACAAACCTTCATTCCAAGACTTACTGAGTCAAGCTGAGCAAGAGTTTGGATATGATCATCCAATGGGCGGTCTCACAATTCCTTGCACTGAAGAAGTTTTCCAACATCAAATGAATGGGCTATAA 270 0.4222 MGFRLPAIRRASFSGSQTSSKCVEVPKGYLAVYVGEKHKRFVIPISYLNKPSFQDLLSQAEQEFGYDHPMGGLTIPCTEEVFQHQMNGL 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0180 89 PANTHER AUXIN-INDUCED PROTEIN 6B 1 85 - -
Lal1g0180 89 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 85 IPR003676 GO:0009733
Lal1g0180 89 Pfam Auxin responsive protein 12 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0180 Lal-Chr1 1108902 1109171 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0180 24 86 Calmodulin-binding Proteins AT3G43120 52.381 2.73e-18 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0180 K14488 - gmx:100816803 151.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0180 1 1108902 1109171 Lal1g0180 1 1108902 1109171 ECH